Rhodococcus ruber: CS378_00970
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Entry
CS378_00970 CDS
T05142
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00020
Citrate cycle (TCA cycle)
rrz00620
Pyruvate metabolism
rrz01100
Metabolic pathways
rrz01120
Microbial metabolism in diverse environments
rrz01200
Carbon metabolism
rrz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CS378_00970
00620 Pyruvate metabolism
CS378_00970
Enzymes [BR:
rrz01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
CS378_00970
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
RnfC_N
Biotin_lipoyl_2
ATP-grasp_3
GCV_H
DUF2118
Motif
Other DBs
NCBI-ProteinID:
ATQ27431
UniProt:
A0A098BK65
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Position
212875..216276
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AA seq
1133 aa
AA seq
DB search
MFSKVLVANRGEIAIRAFRAAYELGAGTVAVFPYEDRNSLHRLKADEAYQIGEQGHPVRA
YLSVAEIVAAAKKAGADAVYPGYGFLSENPDLAAACAAEGITFIGPSAHVLELTGNKARA
IAAAKAAGLPVLASSEPSADLEELLEAAESMEFPIFVKAVAGGGGRGMRRVAERSQLREA
IEAASREADAAFGDPTVFLEQAVVDPRHIEVQILADGQGNVMHLFERDCSLQRRHQKVIE
LAPAPNLAPELRERICADAVAFAKQIGYSCAGTVEFLLDSRGNHVFIEMNPRIQVEHTVT
EEITDVDLVQAQLRIASGESLTDLGLSQDKVAIRGAALQCRITTEDPANGFRPDTGRISA
YRTPGGAGIRLDGGTSVGAEVSAHFDSMLVKLTARGRDLPTAVARARRAVTEFRIRGVST
NIPFLQAVLDDPDFRAGNVTTSFIDERPQLLTAKTSADRGTKIVEYLADVTVNKPHGERP
TTVYPHDKLPKIDLDVAPPAGSRQRLLALGPDGFAKALREQKALAVTDTTFRDAHQSLLA
TRVRSKDLLTVAGHVARMTPQLLSIEAWGGATYDVALRFLHEDPWERLAALREAIPNINL
QMLLRGRNTVGYTPYPEVVTRAFVREATDTGIDIFRIFDALNNVDQMRPAIDAVRETGTA
LAEVAMSYTGDLSNPGETLYTLDYYLRLAEQIVEAGAHVLAIKDMAGLLRAPAAATLVSA
LRSNFDLPVHVHTHDTPGGQLATYLAAWQAGADAVDGASAALAGTTSQPALSAIVAAAAH
SEHDTGLDLQAVCDLEPYWEALRKVYAPFESGLPAPTGRVYTHEIPGGQLSNLRQQAIAL
GLGDRFEEVEAKYAAADRMLGRLVKVTPSSKVVGDLALHLVGSGVASEEFAADPSRFDIP
DSVIGFLRGELGTPPGGWPEPFRSKALEGRGAPKAEVPLTSEEEKALDDTSTERRATLNR
LLFPGPTQAFLEHRDRYGDTSELSANQFFYGLRRGEEHRVRLDKGVELLIGLEAISEPDE
RGFRTVMCILNGQLRPVSVRDKSVASEVPAAEKADRANPGHVAAPFAGAVTLLVAEGDRV
AAGDTVATIEAMKMEAAITAPRGGVVTRVALAGVSQVEGGDLLVVVSTEESAE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaagtgcttgtcgccaaccgaggcgagatcgcgatccgcgcgttccgtgcc
gcctacgaactgggtgccggtaccgtcgcggtgtttccgtacgaggaccgcaattccctg
caccggctcaaggccgacgaggcctaccagatcggggagcaggggcatccggtccgcgcg
tacctgtccgtggctgagatcgtcgccgccgccaagaaggccggggccgacgcggtctac
cccggctacggcttcctgtccgagaacccggatctggcggcggcgtgtgcggcggaaggc
atcaccttcatcggtccgtcggcgcacgtgctggagctgaccgggaacaaggcccgggcg
atcgccgcggcgaaggcggcgggcctgccggtgctggcgtcgtccgagccgtcggccgac
ctcgaggagctgctcgaggcggccgagtcgatggagttcccgatcttcgtcaaggccgtc
gccggcggcggcggacgcggcatgcggcgcgtcgccgagcgcagccagctgcgcgaggcg
atcgaggcggcgtcccgagaggcggacgcggcgttcggcgatcccacggtgttcctcgag
caggccgtggtcgatccccggcacatcgaggtgcagatcctggccgacggccagggcaac
gtcatgcacctgttcgagcgggactgctcgctgcagcgccgccaccagaaggtcatcgag
ctggccccggcaccgaacctcgcgcccgagctgcgcgagcggatctgcgcggacgccgtc
gcgttcgcgaagcagatcggctacagctgcgccggcaccgtcgaattcctcctcgactcc
cgcggcaaccacgtcttcatcgagatgaacccgcgcatccaggtcgagcacacggtcacc
gaggagatcaccgacgtcgacctggtgcaggcgcagctgcgcatcgcctccggcgagtcg
ctgaccgacctgggcctgtcgcaggacaaggtcgccatccgcggcgcggcgctgcagtgc
cgcatcaccaccgaggatccggccaacggcttccggcccgacaccggccgcatcagtgcc
taccgcacgcccggcggcgccggcatccgcctcgacggcggcacctccgtcggcgccgag
gtctccgcccacttcgactcgatgctggtcaagctcacggcccgcggccgcgacctgccc
accgccgtcgcccgcgcccgccgcgcggtcaccgagttccgcatccgcggcgtgtcgacg
aacatccccttcctgcaggccgtgctcgacgacccggacttccgggccggcaacgtcacc
acgtcgttcatcgacgagcgaccccagttgctgaccgccaagacgtccgcggaccgcggc
accaagatcgtcgagtacctggccgacgtgacggtgaacaagccgcacggcgagcgcccg
acgacggtgtacccgcacgacaagctgccgaagatcgacctcgacgtcgccccgccggca
ggctcgcggcagcggctgctcgccctcggcccggacggcttcgcgaaggcgctgcgcgaa
cagaaggccctcgccgtcaccgacaccaccttccgcgacgcgcaccagtcgctgctcgcg
acccgcgtgcgcagcaaggacctgctcaccgtcgccggtcacgtcgcgcggatgaccccg
caactgctgtcgatcgaggcgtggggcggcgccacctacgacgtcgcgctgcggttcctg
cacgaggatccgtgggagcgtcttgcggcgttgcgcgaggccatccccaacatcaacctg
cagatgctgctgcgcggccggaacacggtcggctacaccccgtacccggaggtggtcacc
cgcgcgttcgtccgtgaggccaccgacaccggcatcgacatcttccgcatcttcgacgcg
ctgaacaacgtcgaccagatgcggccggcgatcgacgcggtccgcgagaccgggaccgcc
ctggccgaggtcgcgatgtcctacaccggggacctgtcgaatcccggagagacgctctac
accctcgactactacctgcgcctggcggagcagatcgtcgaggccggggcccacgtgctg
gcgatcaaggacatggccggactgctgcgcgcccccgcggccgccaccctggtctcggcg
ctgcgcagcaacttcgacctgccggtgcacgtgcacacccacgacacccccggcggccag
ctcgcgacgtacctcgcggcgtggcaggccggcgccgacgccgtcgacggggcgtccgcc
gcgctggccggcaccaccagtcagcccgcgctgtcggcgatcgtcgccgcggcggcccac
tcggagcacgacaccggcctcgacctgcaggccgtgtgcgacctcgaaccgtactgggag
gcgctgcgcaaggtgtacgcgccgttcgagtcgggcctgcccgcacccacgggccgcgtc
tacacccacgagatccccggcgggcagctgtcgaatctgcggcagcaggccatcgcgctg
ggcctgggtgaccggttcgaggaggtcgaggcaaagtacgccgccgccgaccggatgctc
ggccggctggtcaaggtcaccccctcgtcgaaggtcgtcggtgacctggctctgcacctg
gtgggctccggcgtcgccagcgaggagttcgcggccgatccgtcccgcttcgacatcccg
gactcggtgatcggattcctccgcggcgagctcggcactccgcccggcgggtggcccgag
ccgttccgctcgaaggccctcgagggccggggcgcccccaaggccgaggtgccgctgacg
tccgaggaggagaaggccctcgacgacacctccaccgagcgccgcgccaccttgaaccgg
ctgctgttccccggcccgacccaggcgttcctcgagcaccgggaccgctacggcgacacc
tcggagctgtcggccaaccagttcttctacgggctgcggcgcggggaggaacaccgggtg
cgcctggacaagggcgtcgagctgctgatcgggctcgaggcgatctccgagccggacgag
cgcggcttccggaccgtgatgtgcatcctcaacgggcagctgcgcccggtgtcggtgcgc
gacaagtccgtcgccagcgaggttccggccgcggagaaggccgatcgcgccaaccccggg
cacgtcgccgcgcccttcgccggcgccgtgaccctcctggtcgccgagggtgaccgggtc
gccgccggcgacaccgtcgccaccatcgaggcgatgaagatggaggccgcgatcaccgct
ccgcgcggcggcgtggtcactcgcgtcgccctcgccggggtgtcccaggtggagggcggt
gacctgctggtcgtcgtgtccaccgaggagagcgcggagtga
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