Rhodococcus ruber: CS378_03110
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Entry
CS378_03110 CDS
T05142
Name
(GenBank) lycopene cyclase family protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00906
Carotenoid biosynthesis
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CS378_03110
Enzymes [BR:
rrz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
CS378_03110
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
2-Hacid_dh_C
DAO
XdhC_C
FAD_binding_2
FAD_binding_3
TrkA_N
3HCDH_N
NAD_binding_8
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ATQ27822
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Position
complement(668739..669863)
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AA seq
374 aa
AA seq
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MIDAKVIDAEVIVVGLGPAGRALAHRAAAAGLDVLAVDPRPDRPWTATYAAWLDELPPWL
PESVLAARVAEPSAWTVRPHRIPRPYGVFDASALQRSLSLDGVRVCTARADVVAADHVAL
ADGAALRARAVIDARGVPAHRSRAQQTAFGVIVDTATAAPALQGRDAWFMDWRRDNRTDS
GDAPSFLYAVPLGQDRMLLEETCLVGRPALPLPELRRRLEVRLAARGVELSGSEPVERVR
FGVQPPPESTRGVARFGARGGLMHPGTGYAVAASLAAADPVAHALAGGRKATAALWSPSA
RAVAQLRASGLRVLLKLHPEQTPAFFAGFFTLPPERQRSYLSGRTDLGGTVAAMTRMFTT
GSPALRGAMLRALW
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgcgaaggtgatcgatgcggaggtgatcgtcgtcgggctcgggcccgccggg
cgcgcgctggcccaccgcgccgccgcggccggtctcgacgtgctcgcggtggatccgcgg
ccggaccggccgtggacggcgacctacgcggcgtggctcgacgagttgcctccctggctg
cccgagtcggtactcgcggcgcgggtggcggaaccgtcggcgtggaccgtgcggccgcac
cgaattccgcgcccctacggtgttttcgacgcatcggcactgcagcgaagtctgtcgctg
gacggcgtgcgggtctgcaccgcccgggcggacgtcgtcgccgccgaccacgtcgccctc
gcggacggtgcggcgctgcgcgcgcgggccgtgatcgacgcgcgcggggtgcctgcccac
cgctcccgcgcccagcagaccgccttcggcgtgatcgtcgacaccgcgaccgctgcaccc
gcgctgcagggtcgcgacgcctggttcatggactggcggcgcgacaaccgcaccgactcg
ggggatgcgccgtcgttcctgtacgcggtgccgctcgggcaggaccggatgctgctcgag
gagacctgcctggtgggccggccggcgctacccctccccgagctgcggcggcgactcgag
gtccggctcgccgcgcgcggggtcgaactgagcggatcggagcccgtcgagcgggtgcgg
ttcggggtgcagccgccgccggaatcgacgcgcggggtggcccggttcggggcccgcggc
ggtctgatgcacccgggcaccgggtacgcggtggcggcctcgctggcggcggccgatccc
gtggcgcacgcgctcgccgggggccgcaaggccacggcggcgttgtggtcgccctcggcg
cgggcggtcgcgcagttgcgcgcctcggggctgcgggtgctgctgaaactgcacccggaa
cagaccccggcgttcttcgccgggttcttcacgctgccgcccgagcgtcagcgctcctac
ctgtccggtcgcaccgacctcggcgggacggtggcggcgatgacccggatgttcacgacg
ggctcgccggccctgcgcggggccatgctgcgcgccctgtggtga
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