Rhipicephalus sanguineus (brown dog tick): 119384060
Help
Entry
119384060 CDS
T07382
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119384060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119384060
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119384060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
CTK3
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
119384060
NCBI-ProteinID:
XP_037508276
EnsemblRapid:
LOC119384060
LinkDB
All DBs
Position
2:212649660..212910298
Genome browser
AA seq
1177 aa
AA seq
DB search
MAKNTLFSYFTKVPKPSNGAVGNAEGERSSLGASGVSCPYRLHDIIWAKLEGYPYWPAIV
SAPPGGACFVKKHSAQPSVHVCFFDSSPSRAWVKIRLTKPFTGAADPPARSTDAHWIRGV
AEAEKALSLDPSDRMALLPATNDSAASNGTDEEDEQPSPKKRRIISDSSSEDEFHPGRNE
VESDSDSISSGVDEDTISDPAPESPEKSPPRKRPTSKSAAVLAKVKKPAPVAAVTSGTWA
HLSYDFLKEGKRRDAAGRLATHPEFNPHTLFIPDSFKAKLTPAMRQWWDMKAEHLDVILF
FKVGKFYELYHMDAVIGVEELGLVFMKGDFAHSGFPEIAYGRYSEALIQKGYKVARVEQT
ETPQMMEERCRKMHRPSKFDRVVRREICRITCRATRTFGSQDGQLCNPELAYLLAIVHGQ
ASTVTDFGICFVDTSVGKFHLGQFSDDSFCSKLRTAVSHHPPVQVLYQSDPTLPAGLRQV
LEGPLHSVPQQALRQGRELWDVSQTLRRLREGAYFGDEYPAALQSFLDPADSTHLTPQEN
GCLALKALGACIWYLSESLIEEDVLTMRSFEKYVPPQTSQTRQDLNSLILDGVCLQNLEV
VRNSSGGTEGTLLATMDFCCTPFGKRLFQQWLCSPPRRVDVIEDRQRAVDDLLRFPHEVQ
QTRELLCSLPDLERLLARIHSQGLARKSSSHPDQRAILYEDTAYNKRKIANLLQALQGFQ
KAAQVAPLWVDALPSLTSRTLAKCLSVGPEAGQFPDLADALEFFEHAFDHEQARKEGRVT
PMPGVDDDYDEAMRSVKEANKALQDYLSQQSQHFRCKATYVGSGKNRFQIEVPESCARLV
DSSYQLQGQRKGYRRYYTEDVKRLVAELVTAEEAQETALKDIMRRIFENFDRRRSHWEAA
IHCLALLDGLLSLTRYSGSLTDASCTPRFLPDQSQPCLMVKAGRHPCLLEHLGAASLIPN
DLSLGGAKDPVLTLLTGPNMGGKSTLMRQAGLLVIIAHMGARVPADACELTLVDRIFTRL
GASDRITSGESTFFVEVNETSAILQHATQHSLVLLDELGRGTSTHDGMALAHAVVQELAS
AIRCCTLFSTHYHHLVQGFRLHPAVQLAHMACMVEDENAEDPTQETIVFLYKCVPGPCPK
SYGFNAAKLAGVPQQVIRTAFEKSSRLEKCIQVARAC
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacacactcttttcttacttcaccaaggtcccaaaacccagcaatggggct
gtggggaatgcagaaggcgaaaggtcgtcgctgggagcatcgggagtgtcctgtccttat
cgtcttcacgacatcatttgggccaaactggaaggctatccctattggccagccattgta
tcagcacctcctgggggagcttgctttgtgaaaaaacacagcgcacaaccatcggtgcat
gtttgtttctttgactcatccccatctcgagcatgggtcaagataaggctaaccaagccg
ttcacaggcgcggctgatccacctgcgcgttctactgatgcccattggatccgtggtgtg
gcagaggctgagaaggcactctctctggacccgtctgaccgtatggcgcttcttcctgcg
actaatgattcagctgcgagcaacggcacagatgaagaggatgagcagccgtcacccaag
aagcgtcgtataatctcggacagcagctctgaggacgagttccatccaggccgaaacgag
gtcgaaagtgattcagactcgatcagcagtggtgtggacgaggacaccatctcagacccg
gcgcctgagtcacctgaaaaaagcccccctcgcaagcggcctacttccaagtcagctgca
gtcctcgccaaggtgaagaaacctgctcctgtggcagctgtgactagcgggacttgggca
cacctctcttatgacttcctcaaagagggcaagcgcagggatgctgctggtcgcttggcc
acccacccggagttcaatccacacacactgttcatcccagacagcttcaaagccaagctg
acaccagccatgcgtcagtggtgggacatgaaggcagagcatttggatgtgatcctcttt
ttcaaggtgggcaagttctacgaattgtaccacatggatgcagtgattggagtggaagaa
cttggcctcgtctttatgaagggggatttcgcccactctggctttcctgaaattgcttat
ggccgatactcggaggccctcattcaaaagggctacaaggtggcacgagtagagcagacc
gagaccccccagatgatggaggaacgatgccgcaaaatgcaccgtccaagcaagtttgat
cgggtggttaggcgagagatatgtcgcatcacgtgtcgggcaacgcggacctttggatca
caggatgggcagctgtgcaaccctgagctagcttacctgcttgccattgtgcatggccag
gcatcaactgtcacggactttggcatctgctttgtcgacacctctgtgggcaagtttcac
cttggccagttcagcgatgactctttctgctccaagctgcgcacagctgtgtcccatcat
ccacctgttcaggtgctgtatcagagtgacccaacgctgcccgctggacttcgccaagtg
cttgaggggcctcttcactcagttcctcagcaggcgctccggcaaggaagggagctctgg
gatgtgtcacaaacactgcgccgtctgcgagagggtgcctactttggtgacgagtatcct
gccgccttgcagtcattcctggatccagctgactccacgcacttgactccccaagaaaat
ggctgtcttgctctgaaagccttgggtgcctgcatttggtacctgtccgagtctctgatc
gaagaagacgttctgacaatgcgcagcttcgagaagtatgtaccacctcagaccagtcaa
actaggcaggacctgaacagcctgattctagatggtgtgtgcctgcaaaacctggaggtg
gtgcgaaattcatctggtggtacagagggaaccctactggcaacgatggacttctgctgc
accccatttggcaagcggctgttccagcagtggctgtgctcccctccaaggcgtgtggat
gtgatcgaggaccggcagcgggcagttgatgatctgctgcgcttccctcatgaggttcag
cagacacgtgagctgctgtgctcactgccagaccttgagaggctgcttgccaggattcac
agccagggcctggcacgaaagagttcttcccacccagaccaacgtgccatcctgtacgag
gatacagcctacaacaagcgcaaaattgccaatctccttcaggcacttcaaggattccaa
aaggctgcccaagtggctccactctgggtggatgcactgccttcgctgacgtcacgaacg
ctggcaaagtgcctgtcagtgggtcctgaggctggccagtttccggacttggccgatgcg
ctcgagttctttgagcatgcttttgaccacgagcaagctcggaaggaggggcgggtcacg
cccatgcctggcgtagacgacgactatgatgaggccatgcggagcgtcaaggaggccaac
aaggccctgcaagactacctgtcccagcagagccagcacttccgctgtaaggcaacctat
gtgggatcgggcaaaaaccgtttccagattgaggtgcccgagtcatgtgcccgacttgtg
gactcctcgtatcagttacagggccagcgcaagggctacaggcggtactacactgaggac
gtgaagcggcttgtagcagagctagtcactgctgaggaggcccaggagacagccctcaag
gacatcatgcgtcgcatcttcgaaaactttgaccgcaggcgaagccactgggaggcagcc
atccactgcctggccctgctggatggcctgctgtcactgactcgctatagcggctcactc
accgatgcctcctgcacaccacgttttctgccagaccagtcacagccatgcctgatggtt
aaagccggacgccatccttgcctacttgagcacctcggtgcagccagcctcatcccgaat
gatctgtccctgggaggagccaaggatcccgtgctgacccttctcactggacccaacatg
ggcggcaaatccactctcatgcgccaagctggtctgcttgtgatcattgcccacatggga
gctcgtgtgccagcagatgcctgtgaactgacccttgtcgaccgcatcttcacccggttg
ggggcaagcgaccgaatcacttctggcgagagcaccttctttgtggaagtgaacgagact
tcagcaatcttgcaacatgccacccaacactccctggtgttacttgacgagctgggccgg
ggtacgtccacgcacgatggcatggccctggcacatgcagtggtccaggagctggcatcg
gccatccgctgctgcacgctgttctcgacccactaccaccacctggtgcagggcttcagg
ctccacccggctgtgcagctggcccacatggcatgcatggtggaagatgaaaatgcagaa
gacccgacacaggagaccattgtgttcctctacaagtgtgtgccaggcccttgccccaag
agctatggcttcaatgctgccaagttggcaggtgtcccacagcaggtgatcaggacagcc
ttcgagaaatctagccgccttgaaaagtgcatccaggtggctcgtgcttgctga
DBGET
integrated database retrieval system
