Rhipicephalus sanguineus (brown dog tick): 119406069
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Entry
119406069 CDS
T07382
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X3
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119406069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119406069
Enzymes [BR:
rsan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119406069
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119406069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119406069
NCBI-ProteinID:
XP_037528855
EnsemblRapid:
LOC119406069
LinkDB
All DBs
Position
9:complement(119390992..119611856)
Genome browser
AA seq
1756 aa
AA seq
DB search
MDLEKIPHRFVDGISFSVFSTEELLRQGVLEVTCAETFDIVGHPTKGGLHDALLGPSDRD
EVCATCGLGFTHCPGHIGYIKLPLLVFNPVFLRTLYQLLRGSCFSCHRLLSPPVACQVTL
AQLQVLQYGAVGTVQELQDIANETMADDDDKGRLTHRGAIRAALQRRIEQCVASVIDGVG
DMEEARRAAGVKNVVECRQRIVKTFIREHLMGAPRKCPHCGELRRAMTIQNNSRFVYTSK
IRPIVKAPTLSVPIRRAHNSFEEEDDVVAEEEEERQAQQKRAEEEAVSGALSYLTPVEAR
AHLRELWTKERPLLQNLFGILALASSSHESPVDMFFLEALVVPPTRFRPMNFMNGRKYEN
AQTVSLSRVLQCCDTLRAVLKLLARRGTDQSERPEDQMETERLEQLVSKVMGKDLDAKMH
FAWNALQVAVNVVVDSELDRLNTNKGTPGIKQILEKKEGLFRKHMMGKRVNYAARSVISP
DPYIDVEEIGVPMVFATKLSYPEPVTERNIAELRRAVINGPDIYPGALLVEREDGGVIRL
DPTNRTRREAVAKQLLTPTEAPQRTFARSKIVHRHLRQGDMLLLNRQPTLHKPSIMAHRA
RVLPGERTLRLHYANCKCYNADFDGDEMNAHLPQSPLAQAEASEVASVNRQYLVPKDGTP
LSGLIQDHVIGGSLLTMQGRFFTREDYNQLVFGALTFVKIGIKLLPPAIQKPEMLWTGKQ
VLSTVLLNCIPHGKPPPTVEGKAKIPAKAWPKGGEAEANMNEGDVVIRDGELLCGILDKA
HYGPTQFGLVHVCYELYGGAVSSLVLSAFARLFTHYLQIFSGFTLGIEDILVTDKADRKR
KRIMKKAKTQGDEVAIKALGLENEDELDAIQLEDRLRAAHVARNDRQMKQLDSSMKSVTD
DVNNQINRACIPDGLLKKFPSNNLQLMVQSGAKGGMVNCMQISCLLGQIELEGRRVPLML
SGRTLPSFLHYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQR
CLIKHLEGLMVCYDQTVRDSDGSVIQFQYGEDGLDVLKMQMLKPSQFPVLIKNSQAVINR
DDIEQCERATDHDELRRLKRAVRKWRKKVDEDAESESRRQSAFTLFSKTQGSLVRDEHLS
RFHNATSETARQAILEAYFNLDERTHHKLNKSIVKRADPVCSKLRSDVHLGAVSERLDTL
IEDYVERNPHGLLLADESEGQGMEKKTVTADEFRKLVYMRNMKAICDPGEPVGLLAAQSI
GEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMVASANIATPTMDLHLLQQPDIEQRAE
ELRVKITAVNLSQVLEEVSVKEMLHVKGRSERYRRYRVHFKFLPRRAYRKKLQATPARIL
RYMETTFLRRLIDAIKRKMEQVSSERVTRTTKARERRGEEAGLAEDAGMAPPCPDADEGG
ESSDEGEGDGDTVARQAAARHTQEREYEEAEEEERVAALSDEEMLDGETVPPAESSLLSA
EEGATSDDIFVSLQETVRDEKAEKLKQARIFSVVKYNTWVLEYDYDDAKEEWCTFTFQLE
LKGSKFDFASLVEEESAKAVFHSVPNIARAFLVKDTKDKSGCGKMLQTEGVNFVEMFRYG
EIIDLKRIYSNDIHAIANTFGIEAARTAIAREVANVFAVYGIEVDPRHLLLVADYMTFDG
SYRACNRIAMENNASPLQQMTFETTMNFLKSATLAGTEDHLNSPSARLVVGRVVPLGTGC
MQLRQPQTPNFKLRSR
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgagaaaatccctcaccgctttgtggacggcatcagctttagcgtgttcagc
accgaagagctgctgcgacaaggcgtgctcgaagtgacttgcgccgaaacattcgacatc
gtcggacacccgacgaaaggcggcctccacgatgccctgcttgggcccagtgatcgtgat
gaagtgtgtgccacctgtggccttggcttcactcactgccctggtcacattggttacatc
aagctgcccctgcttgtgttcaatcctgtgttcctcaggactctctatcagttgctccga
ggcagctgcttctcctgccaccgtttgctttcgcctccggttgcctgccaggtgacactg
gcgcagcttcaggtgctccagtacggcgcagttggtacagtgcaagaactgcaggacatt
gccaacgagaccatggccgacgacgacgacaagggtcggctcactcaccggggagccatt
agggctgcacttcagcgacgcatcgagcagtgcgtggcatcggtcatcgacggtgttggc
gacatggaagaggctcgtcgtgcagcaggcgtgaagaatgttgtggagtgtagacaacgc
atcgtgaagactttcatccgcgaacacctcatgggagcgccacgcaagtgcccgcactgc
ggtgagctgcgccgggccatgaccatccagaacaacagccgctttgtgtacaccagcaag
atccgaccgattgtgaaagcacccaccctgtctgtgccgattaggcgtgcgcacaacagc
tttgaggaagaggacgatgttgtggccgaggaagaagaggagcgccaggcccagcagaag
cgggccgaggaggaggcagtgagcggggccctgtcgtacttgacgcccgtggaggcccgt
gcccatctgcgcgagctgtggaccaaggagcggcctctgctgcagaacctgtttggcatc
ctcgcccttgcatccagctcgcacgagagccccgtcgacatgttcttcctcgaggccctg
gtcgtgcctccgacacggtttcgcccgatgaacttcatgaatggccgcaagtacgagaat
gcgcagacagtgagcctgtcgcgagtgctgcagtgctgtgacaccctgcgcgcagtactc
aagctgcttgcgcgcagaggcacagaccagtctgaacggcccgaagaccagatggagact
gaacggcttgagcaactggtgagcaaagtgatgggcaaggacttggatgccaagatgcac
tttgcctggaatgcactgcaagtggcagtcaacgtcgtcgtggacagtgagctcgatcgt
ctcaacaccaacaagggcacaccaggcatcaagcagatcctggaaaagaaagagggattg
ttccgtaagcacatgatgggcaagcgtgtcaactacgcggcacgctcagtgatctcgcca
gatccatacatagatgtggaggagatcggtgtgcccatggtgtttgccaccaagctgtcg
tacccggagcccgtcaccgagcgcaacatagccgagttgagaagagcggtcatcaatggc
ccggacatttaccccggggctctgctggtggaacgtgaggacggtggggtgatccgactg
gacccgaccaatcgcacgcggcgggaggcagtggccaagcagctgctcactccgaccgag
gcaccccagcgcacgttcgcccgctccaagatcgtgcaccggcacttgcggcagggcgac
atgctgctgctcaaccggcagccgacattgcacaagcccagcatcatggctcacagggca
cgtgtgctgccaggagagcggaccctacggctgcactatgccaactgcaagtgctacaac
gccgactttgacggggacgagatgaatgcccacctgccccagagtcccctggcacaagcc
gaggcctccgaggtggccagcgtcaaccggcagtacctggtgcccaaggacggcacacca
ctcagtgggctcatccaagaccacgtcattgggggatctctcctcaccatgcaggggcgc
ttcttcaccagagaggactacaaccagcttgtgtttggagccctgacttttgtcaagata
ggcatcaagctcctgccaccggccatccaaaagccagagatgctgtggacaggcaagcag
gtgctgtcaactgtgctgctcaactgcataccacatggcaagccacctcctacagttgaa
ggcaaggccaaaattccagccaaggcatggccgaaaggtggcgaagctgaggccaacatg
aacgaaggtgacgtggtcattcgagatggcgagcttctctgcggcatcctcgacaaggct
cactacggtccaacccagttcggtctggtgcatgtctgctacgagctgtacggaggtgcg
gtatccagcttggtgctgagtgcttttgcaaggctgttcacgcactacctgcaaattttt
tctggcttcaccctcgggattgaagacatcctggtcaccgacaaagctgacaggaagcgc
aagcgcatcatgaagaaggccaagacacaaggcgatgaggtggctatcaaggcccttgga
cttgagaacgaggatgagctggatgccatccagctggaggacaggctgagggcggcgcac
gtggcgcgcaatgaccgacaaatgaagcagctcgactccagcatgaagtcggtcaccgac
gatgtcaacaatcagatcaacagggcctgcattccagatggcctgctgaaaaagtttccc
agtaacaacctacagctgatggtgcagtctggggccaagggaggaatggtgaactgcatg
cagatctcgtgcttgctgggccagattgaactggaagggcgccgagtgccacttatgctc
agtggacgcacgttgccgtcctttctgcactacgacacatcaccacgggcaggtggcttc
gtggacggccgttttctgacgggcatccggccacaggagtatttcttccactgcatggcc
ggacgtgagggtttggtggacacggctgtgaagaccagccgcagtggctacctgcaacgc
tgcctcattaagcacctcgaggggcttatggtctgctatgatcagacggtcagggacagt
gatggaagtgtcatacagttccaatacggagaagacggcctggatgtgctcaaaatgcag
atgctcaagccaagccagtttcccgtgctcatcaagaatagccaagcggtcatcaacagg
gacgacattgagcaatgcgaacgtgccactgaccatgacgaactgcgcaggttgaagaga
gcggtgcgcaaatggagaaagaaagtggacgaagacgctgaaagcgaatcgcgcaggcag
agtgctttcaccctcttctctaaaacccaagggtcgttagtgcgtgacgagcacttgagc
cgcttccacaatgcaacttccgagactgctcgtcaggccatcttggaggcctacttcaac
cttgacgaaaggacacatcacaagctcaacaaatccattgtgaagcgtgcagacccggtc
tgttccaagctgaggagcgacgttcatcttggggctgtgtctgaacggctggacacatta
atcgaagactacgttgagagaaatcctcatggcctgctcttggcagatgaatcagaaggg
caaggcatggagaagaagactgtcaccgcggatgagttccggaaactggtctacatgcgg
aacatgaaagccatctgtgacccgggtgaaccggtgggcctgctggctgctcagagcatt
ggtgagccctcgacacagatgacgctgaacacgtttcactttgcgggtcgaggcgagatg
aacgtgactctggggatcccacggatgagggaaatcctcatggtagccagtgccaacatt
gccacgccaaccatggatctacatttgctacagcagccagacattgagcagcgcgctgaa
gagcttcgggtcaagatcaccgctgtcaacctctcacaggtgctcgaggaagtgtccgtc
aaggagatgctgcacgtcaagggacggtcggaacggtaccgtaggtaccgggtccacttt
aaatttttgccccggcgagcataccgcaagaagctgcaggctacgccagctcgcatccta
cgctacatggagaccactttcctcagacggctcatcgatgccatcaagcgcaaaatggag
caagtctcttcagagagggtgacacgcacgaccaaagctcgagaacgtcggggtgaggag
gccggcttggcggaggacgctggcatggcgccaccgtgtccagatgcagacgagggaggt
gagagttcggacgagggcgaaggggacggcgacacggtggcccgacaggctgctgcccgc
cacacccaggagagggagtacgaggaggccgaagaggaagagcgcgtcgctgccctatcc
gatgaagagatgcttgatggcgagactgtgccccctgctgagtcttctctgctgtcagcc
gaagaaggagccacttccgatgacatctttgtctcgctccaagagacggttcgtgatgag
aaggccgagaagctgaagcaagccaggattttttcagtggtgaagtacaacacctgggtc
ctggagtacgactatgacgatgccaaggaagagtggtgtacgtttacatttcagcttgag
ctgaaaggaagcaagtttgactttgcctcactggtggaagaagagtctgcgaaggcagtc
ttccattccgtgcctaacattgcacgggccttcctagtcaaggacaccaaggacaagtcg
gggtgcgggaagatgctccagacggaaggtgtcaactttgtggagatgttccgatatggc
gaaataattgatctgaagcgcatctacagcaacgacattcatgccattgccaacacattt
ggaattgaagctgcaagaacagcaatagctcgggaggtggccaacgtgtttgccgtgtat
ggcattgaggtagatccgaggcacctgctgcttgtcgcagactacatgacgtttgacggc
agctaccgtgcgtgcaaccgcattgccatggagaacaacgcctcgcccctgcagcagatg
accttcgagacgaccatgaactttctcaagtcggctaccctggccggtacggaagaccac
ctcaactccccatccgctcgtcttgtggtgggccgggtggtgcctctgggcacaggttgc
atgcagctgcggcagccccagactccgaacttcaagctgcgctctcgttag
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integrated database retrieval system
