Ralstonia solanacearum CFBP2957: RCFBP_11666
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Entry
RCFBP_11666 CDS
T01272
Symbol
trmC
Name
(GenBank) oxidoreductase, FAD-binding family protein
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsc03016
]
RCFBP_11666 (trmC)
Enzymes [BR:
rsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
RCFBP_11666 (trmC)
Transfer RNA biogenesis [BR:
rsc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RCFBP_11666 (trmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox
Pyr_redox_2
Lycopene_cycl
NAD_binding_9
FAD_binding_2
FAD_binding_3
GIDA
HI0933_like
3HCDH_N
Amino_oxidase
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CBJ42957
LinkDB
All DBs
Position
1721831..1723837
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AA seq
668 aa
AA seq
DB search
MPRGLVLATPSLTQDGTPFSTHYDDVYHSTEGGLAQAHHVFLGGNGLPEGWRDRRAFTIV
ETGFGQGLNFLATWAAWRDDPQRCARLDFVSIEKHPFDQAGLGVVHPTQGPLAALAEALR
RAWPVPVPGVHRLVFEQGRVTLTLLFGDALEMLPQLSCAADAFYLDGFSPAKNPDLWQPP
VFKQLARVARAGATLATYTAAGVVRNGLREAGFDVRKVPGFGRKREMTVAAFPTHWRTRR
GPAEAPVWPERRAIVIGAGLAGCAVAERLAARGWRVTLLEAQDAPARGTSAHRAAAMHPH
VSIDDSVLSRLSRAGNLLARRHWGGLDRAGFATGFHPTGVLQLAEHAADEAEQQRIVQAL
GFPPDYIDWLDSAQATARVGAGVPRGGWWFAQAGWVAPPDICRASLAAAGNAIDTRWNTR
VESLRQCDAGWQACDAQGNVMASAPVVVLANSLDAGRLAPLASAALKPVRGQLTDVPVAD
LEDESPWPRAVVCGDGYLLPREPGAPTVRVGSSFQPGETACDERPADHAANLQRLAGLLP
AHAAALAHLDPARLCGYVGVRCVSANRLPLIGAVVDEAAVMAPGFRLRGPHAALPRLPGL
YAALAYGSRGLTWSVLGAELLAAQIDGGPLPLESDLAAALDPGRFLMRALRHGGGAASPG
EALPGTLG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcggccttgttctcgccacgccgtccctgacgcaggacggcacgccattttcc
acccactacgacgacgtctaccacagcaccgaagggggcctggcgcaggcgcatcacgtc
ttcctgggcggcaacggcctgcctgaaggctggcgcgacaggcgcgcgttcaccattgtc
gagaccggcttcggccagggcttgaacttcctggcgacgtgggcggcctggcgcgacgat
ccgcagcgctgtgcacggctcgatttcgtctcgatcgaaaagcatccgttcgaccaggcg
gggctgggcgtggtgcatcccacgcaggggccgctggccgcactggcggaagccttgcgc
cgggcctggccggttcctgtgccaggcgttcatcggctggtgttcgagcaggggcgcgtc
acgctcacactgcttttcggcgacgcgctggagatgttgccgcagttgtcctgtgccgcc
gatgccttctacctcgacggtttttctccggccaagaatccggacctgtggcagccgccg
gtgttcaagcaactggcccgtgtcgcgcgcgccggcgccacgctggcgacttacaccgcg
gccggcgtggtccgcaacggcttgcgcgaggcggggttcgacgtgcgcaaagtgcccggt
ttcgggcgcaagcgcgagatgaccgtcgccgcgttcccaacccattggcgcacccgacgc
ggtccggcggaggcgccggtctggccggagcggcgcgcgatcgtgatcggtgccggactg
gccggctgtgccgtcgccgaacggctggccgcgcgcggctggcgcgtgacgctcctggag
gcgcaggatgccccggcacgcggtacgtccgcacatcgcgccgcggccatgcacccgcat
gtgtcgatcgacgacagcgtgttgtcgcgcctgtcccgtgcgggcaacctgctggcgcgc
cgccactggggtgggctcgatcgtgccggattcgccaccggcttccacccgaccggtgtc
ctgcaactggccgaacatgcggccgacgaggccgagcagcagcgcatcgtgcaagcactc
ggttttccgcccgattacatcgactggctcgattccgcccaggccaccgcgcgcgtcggt
gccggcgtgccgcgaggcggctggtggtttgcgcaagccggctgggtggcgccgccggat
atctgccgtgccagcctcgccgcggcgggcaatgcgatcgacacgcggtggaacacccgg
gtcgaatccctgcggcagtgcgatgcgggatggcaagcgtgcgatgcacagggcaacgtg
atggcgagcgcgcccgttgtcgtgctcgccaacagtctcgatgcgggccggctggcgccg
ttggcgtccgccgcgctcaaaccggtgcgcggccaactgacagatgtgcctgtcgccgac
ctcgaagacgaatcgccctggccgcgcgccgtcgtttgcggcgacggctatctgctgccc
cgggagcctggtgccccgaccgtgcgcgtgggttcctcgttccagccgggcgagaccgcg
tgcgacgagcgccccgccgatcacgccgccaacctgcagcggttggcgggattgctcccc
gcgcatgctgccgcattggcccatctggatccggcgcgattgtgcggctacgtgggtgtg
cgctgtgtctctgccaaccggttgccgctgatcggcgcggtggtggatgaggctgcggtc
atggcaccgggtttccgcctgcgtgggccgcatgccgcgctgccgcgtctgcctgggctc
tacgctgcgcttgcttatggctcgcgcggcctgacatggtcggtgttgggcgcggaactg
cttgcggcgcagatcgacggtggtccgcttccgctcgagtccgatctggctgcggcattg
gatcccggccgcttcctgatgcgggcgctgcgccatggcgggggcgccgcatcgccaggc
gaggccttgcccggaaccctcggctga
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