Runella slithyformis: Runsl_2171
Help
Entry
Runsl_2171 CDS
T01553
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18660
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rsi
Runella slithyformis
Pathway
rsi00061
Fatty acid biosynthesis
rsi00280
Valine, leucine and isoleucine degradation
rsi01100
Metabolic pathways
rsi01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Runsl_2171
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Runsl_2171
Enzymes [BR:
rsi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
Runsl_2171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEI48584
UniProt:
A0A7U4E5W5
LinkDB
All DBs
Position
complement(2502998..2504482)
Genome browser
AA seq
494 aa
AA seq
DB search
MLQLVKNASRHAGNQAIVSDNQTYTYQHLLDASYGVASLLLDQTPDLAENRVAFMVSPGF
DYVRVQWGIWRAGGVAVPLCITYPLPSLQYVIDDTDAQIIVAGPEYAELLAPLAAEKGLR
FMALADVNGLSFSSQKLPNITPGRRAMILYTSGTTNLPKGVVTTHRTIEAQVSTLVKAWE
WSAQDHILCVLPLHHVHGIINVISCALWAGATVEFLPSFSAEAVFDAFLQGKINVFMAVP
TIYFKLIAYWEGLPLGQQQAISENLSGFRLMVSGSAALPVSVMEKWKLISGHTLLERYGM
TEIGMGISNPYHGERKAGYIGKPLPGVRVRLVDDQNQVVKAEQPGEIQVKGKNVFLEYWQ
RPEATQKTFTEDGWFKTGDVAVVEKGYYRILGRDSIDIIKSGGYKISALEIEEVLRTHPA
VSDCSVVGIPNEEWGELVVAALMVNDPEIDLKVLNQWLRERMPAYKVPRHYKLVDELPRN
AMGKVTKNDIKKLF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctacagttagtcaaaaacgcctcccgacacgcgggcaaccaagccattgtctccgac
aatcaaacgtatacataccaacatttactggatgcttcgtacggagtggcgtcgctgttg
cttgaccaaacgcccgacctggccgagaaccgcgtcgcctttatggtttcgccgggtttt
gactatgtacgggtgcagtggggcatctggcgcgcgggcggcgtggcggttccgttgtgc
atcacctatccgctgccttcattgcagtacgtcatcgacgataccgacgcccaaatcatc
gtcgccgggcccgaatacgccgagcttttggctcccttggcagcggagaaaggcctccgt
ttcatggcgttggccgacgtcaacggcttgtctttttcttcccaaaaactgccgaatatc
acgcccggccgccgggctatgatcctgtataccagcggcacgaccaacctgcccaagggc
gtggtcactacccaccgcaccatcgaagcgcaggtgtcgaccttggtgaaagcctgggaa
tggtcggcccaagaccatattttgtgcgtgttgccgctgcaccacgttcacggcatcatc
aacgtcatttcgtgtgcgctttgggcgggcgcgacggtggagtttttgccttctttttcg
gccgaggcggtctttgacgcgtttttgcagggcaaaatcaacgtattcatggccgtaccg
accatttatttcaagctcattgcttattgggaaggcttgcctctaggccaacagcaagcc
atttcagaaaatctttcaggcttccgcctgatggtttccggctcggcggcattgcctgtg
tcggtcatggaaaaatggaagcttatcagcggacataccctgctggagcgctacggcatg
accgagatcggcatgggcatcagcaatccgtaccacggcgaacgcaaagcgggctacatc
ggcaagcccttaccgggcgttcgggtccgattggttgatgaccaaaaccaagtcgtgaaa
gcagagcagcccggcgagattcaggtaaaaggtaaaaacgtatttttggaatactggcag
cgccccgaagccacccaaaagaccttcacagaggatggttggttcaaaacgggcgacgtg
gccgtggtcgaaaaaggctactaccgcatcctggggcgcgattccatcgacatcatcaaa
tcgggcgggtataagatttcggcgctggaaatcgaagaagtactgcgcacgcatcccgcc
gtgagcgattgcagcgtggtgggtattcccaacgaagaatggggggaattggtcgtggcg
gcattgatggtcaatgatcccgaaatcgacctcaaggtgctcaatcaatggctccgcgag
cgtatgcccgcctacaaagtaccgcgccactacaaacttgtcgacgaactcccccgcaac
gccatgggcaaagtcaccaaaaacgatatcaaaaaactgttttga
DBGET
integrated database retrieval system
