Runella slithyformis: Runsl_4923
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Entry
Runsl_4923 CDS
T01553
Name
(GenBank) hypothetical protein
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
rsi
Runella slithyformis
Pathway
rsi00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Runsl_4923
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Runsl_4923
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42M
Glyco_hydro_42
RE_Bsp6I
Motif
Other DBs
NCBI-ProteinID:
AEI51233
UniProt:
A0A7U3ZQ31
LinkDB
All DBs
Position
5689087..5691285
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AA seq
732 aa
AA seq
DB search
MKFTAFSFFFFLFFSFLTPIHAQNDPYLHRRYDALHDSPMQQKFRKLAPMPAGVVYVQQP
NEGEKEMREHFRNMKKLGFNALKQIMPLPTWTIEQISSVALEEGIIPWWYGEGGYEEITP
ALLEQLGIAKSLSMNDIIQHPKMVNYQKEVAKKRIQNIEKYIQNSPDKKFMRVTSVAYDP
EIGGRGVELSDKGEALFLDWLKKRYRTVENLNQAWNQYHAGLFLNEQRVLSDWDDVAKNW
RNLTGREYNHVKDIYRFKVEHNLGRIRESAAQFNRFDPNAPYRGGGELAVFHPFAWYGVD
MEGIADVLTQYGSFYPSMHFSWHYNLVKGEITKSLYQQASLMNDFNKGGWTGGWESTGGP
MQMDGEKNPGHNNSYYVGPDELMQLYLSQLAAGFKGFGIWCWNARSAGKEGGEYSLLDRN
GQITDRAVAIGQLGKAMQKYRFELWNAHKEPLVGILYDWENEATWGAMSIPGREDFRFQP
VKARIGISNLLMTNNVPFEYLTPNDLFKGLAGRYKVLYLPAMLTMRKELLPLLKKYVQEG
GRLVMDLPSGWYDENTVNLPTGKGSEFEQLFGATIDDFQFSGTNRQLRISGKEVQGFTIN
STATKARVAERYDNGKPAILEHSIGKGKAILLGFQAALNAFETSAKASFPLLQYTLGAYS
SSYSCLNALVYRLAAPEADHYFVLNESTAQTVALTFKNHSYKRITDAVTGAPVNISQITL
TTKGGRWLRAEK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccgcattttccttttttttcttcctgtttttcagctttctaaccccaatc
cacgcccaaaacgacccgtacctgcaccggcggtacgacgccctgcacgactcacccatg
cagcagaagtttcgcaagttggctcctatgccggcgggggtcgtctatgtacaacaaccc
aacgaaggcgaaaaagaaatgcgggagcacttcagaaacatgaaaaaactgggattcaac
gcattaaagcagatcatgcccttgccgacctggaccattgagcagatttcgtcggtggcg
ctggaagaaggcattattccgtggtggtacggcgaaggcggttacgaagagattaccccg
gcgcttttggaacaacttggcatagccaaaagcctatcaatgaacgacataattcagcac
cccaagatggtgaattatcaaaaagaggttgccaaaaaacgaattcagaacattgaaaaa
tacatccaaaacagccccgacaaaaaattcatgcgagtcacgagcgtggcctacgacccc
gaaatcggtgggcgcggcgtagagctcagtgacaaaggcgaagcattgtttttggattgg
ctcaaaaagcgctaccgcacggtagaaaacctgaatcaagcctggaatcagtaccacgcg
gggcttttcctgaacgaacagcgggtgttgagtgattgggacgatgtagcaaaaaattgg
cgcaatctcacgggcagagaatacaatcatgtcaaagacatttatcggtttaaggttgag
cacaatctcggccgaatccgcgaatctgccgcccaattcaatcgcttcgaccccaacgca
ccgtaccgaggcggcggcgaattggccgtttttcacccctttgcgtggtacggagtggac
atggaaggcatcgccgacgtgttgacgcaatacggctccttttacccctccatgcatttt
tcgtggcattataatttggtcaaaggtgaaatcaccaagtcactctatcagcaggcttcg
ctgatgaatgacttcaataaaggcggctggacgggcggctgggaaagcaccggcggcccc
atgcagatggatggtgaaaaaaatccgggtcacaacaactcctactacgttggcccggat
gaattaatgcagctctacctcagtcagttggcggcgggcttcaaaggttttgggatttgg
tgctggaatgcccgaagtgcgggaaaagaaggcggtgagtatagcctgctggatcgaaac
ggacaaatcaccgaccgcgccgtggccatcgggcaattgggaaaagccatgcaaaaatac
cgttttgaactctggaatgcccacaaagagccgctcgtgggtatcctgtacgactgggaa
aatgaggccacttggggagctatgagcattccgggacgcgaagattttagatttcagccc
gttaaagcccgaattggaatcagcaatcttctcatgaccaacaacgtcccttttgaatac
cttacccccaacgatctttttaaaggcttagccgggcgctacaaagtgctgtatctgccg
gccatgctcacgatgcgaaaagaactgttgcccctgttgaaaaaatacgtgcaggaaggc
ggacgtttggtcatggacttaccttccggctggtacgacgaaaataccgtcaacctcccg
accggcaaaggctcggagtttgagcagctttttggggctacgattgatgattttcaattt
tcgggcaccaatcggcaactgcgtatttcggggaaagaagtacagggttttaccatcaat
tcaacggctaccaaggcccgtgtggcagaaagatacgacaatggtaaacccgccatttta
gaacattctatcggcaaagggaaagccatcttactcggctttcaggcagcccttaacgca
tttgaaacctctgcaaaggcttcatttccccttttgcagtacacactcggtgcttattca
tcttcctattcctgccttaacgccctcgtatatcgtttggcggcacccgaagccgaccat
tattttgtgttgaatgagtcgaccgcccaaacggttgcgctgacctttaagaatcacagc
tataaacgtatcaccgatgccgtcaccggtgcgccggtcaacatcagccaaatcacattg
acgaccaagggcgggcgttggctacgggcggaaaaataa
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