Runella slithyformis: Runsl_5021
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Entry
Runsl_5021 CDS
T01553
Name
(GenBank) 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
KO
K01625
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:
4.1.2.14
4.1.3.42
]
Organism
rsi
Runella slithyformis
Pathway
rsi00030
Pentose phosphate pathway
rsi00630
Glyoxylate and dicarboxylate metabolism
rsi01100
Metabolic pathways
rsi01120
Microbial metabolism in diverse environments
rsi01200
Carbon metabolism
Module
rsi_M00631
D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Runsl_5021
00630 Glyoxylate and dicarboxylate metabolism
Runsl_5021
Enzymes [BR:
rsi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.14 2-dehydro-3-deoxy-phosphogluconate aldolase
Runsl_5021
4.1.3 Oxo-acid-lyases
4.1.3.42 (4S)-4-hydroxy-2-oxoglutarate aldolase
Runsl_5021
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Gene cluster
GFIT
Motif
Pfam:
Aldolase
G3P_antiterm
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AEI51330
UniProt:
A0A7U3ZQ55
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All DBs
Position
complement(5827279..5827917)
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AA seq
212 aa
AA seq
DB search
MSKKAFSWELFQKAPIVGIVRGLSLEEVKHILPMYREAGLTTIEITMNTPGAEKIIQYAV
ENEQEGLNIGAGTVCTKGDLKKALEAGAQFIVTPILDKKVVKACVKKEIPIFPGAFTPSE
IFKAWKLGASMVKVFPATQMGPSYIKELKAPLNQLKLLPTGGVSLENMLEFFNAGADGVG
MGGQLLDKKLIQEKEWELLKAHFSQFTQKLPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaagcattttcgtgggagttgtttcagaaagcccctattgtggggatcgtt
cgggggctgtcgttagaagaagtaaagcatattttgccgatgtaccgggaagcgggcctg
accaccatcgagatcacaatgaatacgcccggtgccgagaagatcattcaatacgccgtt
gaaaatgagcaggaagggctgaacatcggcgcggggacagtgtgtacaaaaggcgatctg
aaaaaggcactggaggcgggggcgcagtttatcgttaccccgattctggataagaaagtg
gtcaaggcctgcgtcaaaaaagagattcccatctttccgggggcctttacgccttctgag
atctttaaagcctggaagttaggcgcgagtatggtaaaagtgtttcctgctacccaaatg
ggcccgtcgtacatcaaagagctgaaagcgccgttgaatcaattgaaattgttgcccacc
gggggcgtgagtttggaaaatatgctcgaatttttcaatgccggggccgatggcgtggga
atgggcggacagctgttggataaaaaactgattcaggaaaaagaatgggagctgctcaaa
gcccatttttcacaattcacccaaaaacttccccgctga
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