Ralstonia solanacearum PSI07: RPSI07_1973
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Entry
RPSI07_1973 CDS
T01273
Symbol
dapE
Name
(GenBank) N-succinyl-diaminopimelate deacylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl00300
Lysine biosynthesis
rsl01100
Metabolic pathways
rsl01120
Microbial metabolism in diverse environments
rsl01230
Biosynthesis of amino acids
Module
rsl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPSI07_1973 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsl01002
]
RPSI07_1973 (dapE)
Enzymes [BR:
rsl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RPSI07_1973 (dapE)
Peptidases and inhibitors [BR:
rsl01002
]
Metallo peptidases
Family M20
RPSI07_1973 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CBJ51337
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All DBs
Position
2057092..2058243
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AA seq
383 aa
AA seq
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MSPTLALTEDLIRRRSVTPEDKGCQDVLIERLSAAGFQCEAVVSGPDHFRVTNLWAVKRG
RAGTGGKLLVFAGHTDVVPTGPVEQWHSDPFEPTHRDGKLYGRGAADMKTSIAGFVVASE
EFVAKHPDHAGSIGFLITSDEEGPAHDGTVKVCDLLRARGERLDYCVVGEPTSVSTLGDM
VKNGRRGSLSGKLTVNGVQGHIAYPHLAKNPIHLAVPALTALAAEKWDDGNAYFPPTTWQ
MSNIHGGTGATNVIPGHVTIDFNFRFSTASTPEGLKSRVHAILDAHGLDYTLAWTLGGEP
FLTERGELSEALSTAIQAECGVATELSTTGGTSDGRFIAKLCPQVIEFGPPNASIHKIDE
HVDVAFIEPLKNVYRRVLETLVA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccacgcttgccctcactgaagacctgatccgccgccgctccgtcacgcccgaa
gacaagggctgccaggacgtgctgatcgaacgcctgtccgccgccggcttccaatgcgaa
gcggtggtcagcgggccggaccacttccgcgtgaccaacctgtgggcggtcaagcgcggc
cgcgcgggcaccggcggcaagctgctggtcttcgccggccacaccgacgtggtgccgacc
ggccccgtggagcagtggcactccgacccgttcgagccgacccaccgcgacggcaagctc
tatggccgtggcgccgccgacatgaagacctcgatcgccgggttcgtggtcgcctcggaa
gaattcgtcgccaagcatccggaccacgccggctcgatcggcttcctgatcaccagcgac
gaggaaggcccggcccacgacggcaccgtcaaggtctgcgacctgctgcgcgcgcgcggc
gagcggctggactactgcgtggtgggcgagccgacctcggtgtccacgctgggcgacatg
gtcaagaacgggcggcgcggctcgctgtcgggcaagctcaccgtcaacggcgtgcagggc
cacatcgcctatccgcacctggccaagaacccgatccacctggccgtgccggcgctgacc
gccctggcggccgagaaatgggacgacggcaacgcctacttcccgccgaccacctggcag
atgtcgaacatccacggcggcaccggcgcgaccaacgtgattccgggccatgtcaccatc
gacttcaacttccgcttctcgacggcgagcacgcccgagggcctgaagtcgcgcgtgcat
gccatcctcgacgcgcacggcctggactacacgctggcctggacgctgggcggcgagccc
ttcctgaccgagcgcggcgagctgtcggaggcactgtcgacggccatccaggccgagtgc
ggcgtcgccaccgagctgtcgaccaccggcggcacgtcggatggccgcttcatcgccaag
ctgtgcccgcaggtgatcgagttcgggccgcccaacgccagcatccacaagatcgacgag
cacgtcgacgtggccttcatcgagccgctcaagaacgtgtaccggcgcgtgctcgaaacg
ctggtcgcctga
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