Ralstonia pseudosolanacearum GMI1000: RSc0915
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Entry
RSc0915 CDS
T00071
Symbol
hldD
Name
(GenBank) probable adp-l-glycero-d-manno-heptose-6-epimerase (adp-l-glycero-beta-d-manno-heptose-6-epimerase) (adp-glyceromanno-heptose 6-epimerase) (adp-hep 6-epimerase) (agme) protein
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00540
Lipopolysaccharide biosynthesis
rso01100
Metabolic pathways
rso01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RSc0915 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
RSc0915 (hldD)
Enzymes [BR:
rso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RSc0915 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
Core region
RSc0915 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
CAD14617
UniProt:
Q8Y0X8
LinkDB
All DBs
Position
966945..967940
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AA seq
331 aa
AA seq
DB search
MTIIVTGAAGFIGANLVKGLNDRGETDIIAVDNLTRADKFRNLVDCEISDYLDKTEFVER
FARGDFGKVRAIFHEGACSDTMETDGRYMMENNYRYTLALMKACLDQGVQFLYASSAATY
GASDTFREDREFEKPLNVYGYSKFLFDQIVRRTLPGALSQIVGFRYFNVYGPREQHKGRM
ASVAFHNFNQFRTEGTVKLFGEYNGYPQGGQMRDFVSVEDVVKVNLFFFDHPDKSGIFNL
GTGRAQPFNDIATTVVNTLREAEGKPALSTEELAQEGLVEYVKFPDALRGKYQCFTQADQ
GKLRAAGYSAPFLTVQEGVARYCRWLMAQPA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtgaccggcgcggccggcttcatcggcgccaacctcgtcaagggcctc
aatgaccgcggcgagaccgacatcatcgcggtcgacaacctgacccgcgccgacaagttc
aggaacctggtcgactgcgagatcagcgactacctggacaagaccgagttcgtcgagcgc
tttgcgcgcggcgacttcggcaaggtccgcgcgatcttccacgagggcgcctgctccgac
accatggagaccgacggccgctacatgatggagaacaactaccggtacacgctcgcgctg
atgaaggcctgcctggaccagggcgtgcagttcctctacgcgtcgtcggcggccacctac
ggcgcgtcggacaccttccgcgaggaccgcgagttcgagaagccgctcaacgtgtacggc
tactccaagttcctgttcgaccagatcgtgcgccgcacgctgccgggcgcgctgtcgcag
atcgttggcttccgctatttcaacgtctacggcccgcgcgagcagcacaaggggcgcatg
gcgtcggtggccttccacaacttcaaccagttccgcacggaaggcaccgtcaagctgttc
ggcgagtacaacggctatccgcagggtggccagatgcgcgacttcgtgtcggtggaggac
gtggtcaaggtcaacctgttcttcttcgaccatccggacaagtcgggcatcttcaacctc
ggtaccggccgcgcccagccgttcaacgacatcgcgaccaccgtggtgaacaccctgcgc
gaggccgaaggcaaaccggcgctctcgaccgaagagttggcgcaggaaggcctggtcgaa
tacgtgaaatttcccgatgcgctgcgcggcaaataccagtgcttcacccaggccgaccag
ggcaagctgcgcgcggctggctacagcgcgccgttcctgaccgtgcaggaaggcgtggcg
cgctactgccgctggctgatggcccagccggcctga
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