Ralstonia pseudosolanacearum GMI1000: RSc1103
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Entry
RSc1103 CDS
T00071
Symbol
soxA2
Name
(GenBank) probable sarcosine oxidase (alpha subunit) oxidoreductase protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00260
Glycine, serine and threonine metabolism
rso01100
Metabolic pathways
Module
rso_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSc1103 (soxA2)
Enzymes [BR:
rso01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
RSc1103 (soxA2)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
RSc1103 (soxA2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
DAO
FAD_binding_3
GIDA
HI0933_like
Thi4
Pyr_redox
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CAD14805
UniProt:
Q8Y0E1
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All DBs
Position
1159152..1162163
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AA seq
1003 aa
AA seq
DB search
MSQKDRLGTGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
MTAGVEEPNAVVQLESGPYSVPNARATEIELYQGLIATSVNAEPSLENDRYAISQMFSRF
LPAGFYYKTFMWPRKMWPKYEEKIREAAGLGKAPDMRDADRYDKCYAHCDVLVVGGGPTG
LAAAHAAAMAGARVILVEDQRELGGSLLSCRAEIGGKPALQWVEKIEAQLRKLPDVSILT
RSTAFGYQDHNLVTVTQRLTDHLPISMRKGTRELLWKVRAKRVILATGAHERPIVFGNND
LPGVMLAGAVSTYIHRFGVLPGRDAVVFTNNDRAYQTALDLKACGAKVTVVDARAPGNGA
LPAVAKRQGVTVMHGAVITAASGKWRVSSVDVASYANGQVGGKQKTLPCDLVATSGGFSP
VLHLFAQSGGKAQWNDDKACFVPGKTVQAEASVGAAAGEFALAHALQLAVDAGAEAAQAA
GCTAAQRAVAPRVAETAEGALQPLWLIGSREAAARGPKQFVDFQNDVAVTDILLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKSIPETGTTTFRPNYTPVSFGTFAG
RELGNFLDPVRKTCIHEWHVEHGALFEDVGNWKRPWYFPKNGEDLHAAVKRECLAVRNGV
GMLDASTLGKIDIQGPDAVKLLNWVYTNPWGKLDVGKCRYGLMLDENGMVFDDGVTVRLA
DQHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVC
QDIDFGNEAFPFMSYRNGTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSITPSDLGMGGLVAKTKDCLGKRSLARSDTA
KAGRKQFVGLLTDDAQCVLPEGAQIIDKDTQVRVTEPTPMIGHVTSSYYSPILQRSIALA
VVKGGLGKMGESVVIPLANGRRVTAKIASPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgtctcggtacgggtggccgtatcaatcgtgcgattccgctgacg
tttacgttcaacggccgcacgtatcagggtttccagggcgacacgctggcgtctgcgctg
ctcgcgaatggcgtgcatttcgtcgcgcgcagcttcaagtaccaccgtccgcgcgggatc
atgacggcgggcgtcgaggagccgaacgcggtggtgcagctcgagtcgggcccgtacagc
gtgccgaatgcgcgcgcgaccgagatcgagctataccaggggctcatcgccaccagcgtg
aacgccgaaccgtcgctcgaaaacgatcgctatgcgatcagccagatgttttcgcgcttc
ctgcccgccggtttctactacaagaccttcatgtggccgcgcaagatgtggccgaagtac
gaagaaaagatccgcgaagcggccggccttggcaaggcgcccgacatgcgcgacgcggac
cgctacgacaagtgttacgcgcactgcgacgtgctcgtcgtgggtggcggcccgacgggg
ctcgcggccgcacacgcggcggcgatggccggggcgcgcgtcatcctggttgaagaccag
cgcgagcttggcggcagcctgctgtcgtgccgcgcggaaatcggcggcaagccagcgctg
cagtgggtcgagaagatcgaagcccagctgcgcaagctgcccgacgtgagtatcctcacg
cgcagtaccgcgttcggctatcaggatcacaacctcgtgaccgtcacgcagcgcctgacg
gatcatctgccgatctcgatgcgcaagggcacgcgcgagctgctgtggaaggtccgcgcc
aagcgcgtcattctcgcaacgggcgcgcacgagcggccgatcgtgttcggcaacaacgac
ctgccgggtgtgatgctcgcgggcgccgtgtccacgtacatccatcgcttcggcgtgctg
ccggggcgtgacgccgtcgtgttcacgaacaacgaccgcgcctaccagaccgcgctcgat
ctgaaggcgtgcggtgcgaaggtcacggtcgtcgacgcgcgcgcacccggcaacggtgcg
ctgcccgccgttgcgaagcgccagggcgtaacggtgatgcatggcgcggtgatcacggct
gcgtccggcaagtggcgcgtgtcatcggtcgacgtcgcgtcttacgcgaatgggcaggtg
ggcggcaagcagaagacgctgccgtgcgaccttgtcgcgacgtcgggcggtttcagcccg
gtgctgcacctgttcgcgcaatcgggcggcaaggcccagtggaacgatgacaaggcgtgc
ttcgtgccgggcaagaccgtgcaggccgaggcgagcgtcggcgcggcagcgggtgaattc
gcccttgcgcacgcgctgcagcttgcagtggatgcgggggccgaggctgcacaggcggcg
ggttgcacggccgcgcaacgcgctgtcgcaccgcgggtcgcggaaacggccgaaggcgcg
ctgcaaccgctgtggctcatcggtagccgcgaggccgctgcacgcgggccgaagcagttc
gttgacttccagaatgacgtggcggtcaccgacatcctgctcgccgcgcgcgagggtttc
gagtcggtcgagcacgtcaagcgctacacggcgatgggcttcggcaccgatcagggcaag
ctcggcaacatcaacgggatggcgattctcgcccaggcgctcggcaagtcgattccggaa
acgggcacgacgacgttccgccccaactacacacccgtgtcgttcggcacgttcgcgggc
cgcgagctgggcaacttcctcgacccggtccgcaagacctgcattcatgagtggcatgtc
gagcacggtgcgctgttcgaagacgtcggcaactggaaacgaccctggtattttccgaag
aacggcgaagacctgcatgcggccgtgaagcgcgagtgcctggcggtgcgcaacggtgtc
ggcatgctcgatgcgtccacgctcggcaagatcgacatccagggccccgacgcggtgaag
ctgctgaactgggtgtacacgaacccgtggggcaagctcgacgtcggcaagtgccgctac
gggctgatgctcgatgagaacgggatggtgttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcatttcatgatgacgaccacgacgggcggcgcagcgcgggtgctcacctggctc
gagcgctggctgcagaccgagtggcccgacatgaaggtgcggctcgcgtccgtcaccgac
cactgggcgacgttcgcggtggtcggcccgaagagccgcaaggtcgtgcagaaggtgtgc
caggacatcgacttcggcaacgaagcgttcccgttcatgagctatcgcaacggcaccgtc
gcgggcgccaaggcgcgcgtgatgcggatcagcttctcgggcgaactggcctacgaagtg
aacgtgccggccaatgccgggcgcgcggtgtgggaagcgctgatggccgcgggtgccgag
ttcgacatcacgccgtacggcaccgaaacgatgcacgtgctgcgcgcggaaaagggctac
atcatcgtcggccaggacaccgacggttcgatcacgccatccgacctcggcatgggcggc
ctcgtcgcgaagacgaaggactgcctcggcaagcgttcgctcgcgcgttccgataccgca
aaggcgggccgcaagcagttcgtcggcctgttgaccgacgatgcgcagtgcgtgctgccg
gagggcgcgcagatcatcgacaaggacacgcaggtccgcgtgacggaaccgacgccgatg
atcggccacgtgacgtcgagctactacagcccgatcctgcaacgttcgatcgcgctggcg
gtggtgaagggtggtctgggcaagatgggcgagagcgtcgtgattccgctggccaacggc
aggcgtgtcaccgcgaagatcgcgagcccggttttctacgatacggaaggggtgcgtcag
catgtggaatga
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integrated database retrieval system
