Ralstonia pseudosolanacearum GMI1000: RSc1390
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Entry
RSc1390 CDS
T00071
Symbol
dapE
Name
(GenBank) probable succinyl-diaminopimelate desuccinylase protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00300
Lysine biosynthesis
rso01100
Metabolic pathways
rso01120
Microbial metabolism in diverse environments
rso01230
Biosynthesis of amino acids
Module
rso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSc1390 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rso01002
]
RSc1390 (dapE)
Enzymes [BR:
rso01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RSc1390 (dapE)
Peptidases and inhibitors [BR:
rso01002
]
Metallo peptidases
Family M20
RSc1390 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CAD15092
UniProt:
Q8XZK5
LinkDB
All DBs
Position
complement(1482385..1483545)
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AA seq
386 aa
AA seq
DB search
MTAMSPTLALTEDLIRRRSVTPEDKGCQDVLIERLSAAGFQCETVVSGPDHFRVTNLWAV
KRGRAGTDGKLLVFAGHTDVVPTGPVEQWRSDPFEPTHRDGKLYGRGAADMKTSIAGFVV
AAEEFVAVHPDHAGSIGFLITSDEEGPAHDGTIKVCDLLRTRGERLDYCVVGEPTSVSTL
GDMVKNGRRGSLSGKLTVNGVQGHIAYPHLAKNPIHLAVPALTALAAEQWDDGNAYFPPT
TWQMSNIHGGTGATNVIPGHVIIDFNFRFSTASTPEGLKSRVHAILDAHGLDYTLAWTLG
GEPFLTERGELSEALSSAIGAECGVATELSTTGGTSDGRFIAKLCPQVIEFGPPNASIHK
IDEHVDVAFIEPLKNVYRRVLETLIA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccatgtcgcccacgcttgccctcactgaagacctgatccgccgccgctccgtc
acgcccgaagacaagggctgccaggatgtgctgatcgaacgcctgtccgccgccggcttc
caatgcgaaaccgtggtcagcgggccggaccacttccgcgtgaccaacctgtgggccgtc
aagcgcggccgcgcgggtaccgacggcaagctgctggtcttcgccggccacaccgacgtg
gtgccgaccggccccgtggagcagtggcgctccgacccgttcgagccgacccaccgcgac
ggcaagctctatggccgcggcgccgccgacatgaaaacctcgatcgccgggttcgtggta
gccgccgaggaattcgtcgccgtgcatccggaccacgccggctcgatcggcttcctgatc
accagtgacgaggaaggcccggcccacgacggcaccatcaaggtctgcgacctgctgcgc
acgcgcggcgagcggctggactactgcgtggtgggcgagccgacctcggtgtccacgctc
ggcgacatggtcaagaacgggcgacgcggctcgctgtcgggcaagctgaccgtcaacggc
gtgcagggccacatcgcctatccgcacctggccaagaacccgatccacctggccgtgccg
gcgctgaccgcgctggcggccgagcagtgggacgacggcaacgcctacttcccgccgacc
acctggcagatgtcgaacatccacggcggcaccggcgcgaccaacgtgattccgggccac
gtcatcatcgacttcaacttccgcttctcgacggcgagcacgccggagggcctgaagtcg
cgcgtgcacgccatcctcgacgcgcacggcctggactacacgctggcctggacgctgggc
ggcgagcccttcctgaccgagcgcggcgagctgtcggaggcgctgtcgtcggccatcggg
gccgagtgcggcgtcgccactgaactgtcgaccaccggcggcacgtcggacggccgcttc
atcgccaagctgtgcccgcaggtgatcgagttcgggccgcccaacgccagcatccacaag
atcgacgagcacgtcgatgtggccttcatcgagccgctcaagaacgtgtaccggcgcgtg
ctggaaacactgatcgcctga
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