KEGG   Rhizoctonia solani: RhiXN_01130
Entry
RhiXN_01130       CDS       T09256                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit C5
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03020  RNA polymerase
rsx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RhiXN_01130
  09124 Replication and repair
   03420 Nucleotide excision repair
    RhiXN_01130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsx03021]
    RhiXN_01130
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_01130
Enzymes [BR:rsx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RhiXN_01130
Transcription machinery [BR:rsx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     RhiXN_01130
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      RhiXN_01130
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_1 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R
Other DBs
NCBI-GeneID: 67023412
NCBI-ProteinID: XP_043179961
LinkDB
Position
4:complement(join(3344997..3345106,3345163..3345192,3345249..3345269,3345320..3345361,3345413..3345463,3345511..3345573,3345626..3345667,3345716..3349049,3349102..3349162,3349213..3349260,3349312..3349333,3349384..3349463,3349514..3349691,3349741..3350311,3350382..3350636))
AA seq 1635 aa
MQNDTQFAEKIRHVRDPKKRMALVWAHCKGKMICEADETKDDEGAAAQPAKVGHGGCGHV
QPLIRKEGLKLFLVYKKGRADDEEMDGRTSQPEKRLYPASDVYNTLKKIPDSDLALLGLS
EEFARPDWMILTVLPVPPPPVRPSISADGGTVRSEDDLTYKLGDILKASINVRRCEEEGS
PAHVISEFEQLLQFHVATYMDNDIAGIPQALQKSGRPVKAIRARLKGKEGRLRGNLMGKR
VDFSARTVITGDPNLMLDEVGVPRSMAMNLTYPERVTPYNIEWLQMLVRNGPREYPGARY
VVRDSGERIDLRYNKRADTSLQYGWIVERHLKNGDYVLFNRQPSLHKMSMMSHRVKIMPY
STFRLNLSVTPPYNADFDGDEMNMHIPQSEETRAELSQIAWVPRQIISPQANKPVMGIVQ
DTLCGIRKITLRDNFLDWNFVQNILLWVPEWDGQVPVPTILKPKPLWTGKQILSLCIPSG
INVFRAPDKDKRTNRVPANPANDDGICIENGEILYGVVEKKTVGASQAGLIHITFREKGP
EITRDLFTSLQKVVNFWLLHNGFSIGIGDTIADKDTMSKITIHIETAKNNVLQLIQKAQY
DGLRAEPGMTIRESFESHVNRELNMARDKTGKDAQDSLKNDNNVKQMVVAGSKGSFINIS
QMSGCVGQQSVEGKRIPFGFKHRTLPHFNKDDYCAESRGFVENSYLRGLTPQEFFFHAMA
GREGLIDTAVKTAETGYIQRRLVKAMEDIAVCYDGTVRNSLGDIVQFAYGEDGMDGAFIE
RQSVEPYRLSNRAFERKYRVDVLEAGSGFSPGTLQVGLDASSPELQYKLDNEYAQLVKDR
KMLREFIFKTADPNQPHYLPVNLRRVIQNAQQIFHIDRRKPSDLEPAYIMDEVSGLSSRL
IVVRGEDPISLEAQDNATMLFNMHLRSTFATRPVLEELRLTKQAFDWIIGEVETKFNASI
VNPGEMCGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVATNIKTPSLT
VYLQSEYASSKHKAKTIQTELAHTTLRTITATTEIVYDPDPTNTIIDEDRDFVETFFAIP
DESVERTLSQQSPWVLRIQLDRAKVLDKKLDMAYIADRIEQAFYPDMKVIPSDDNAEKLI
LRCRPIVMQDKDEEAFENTEEDIFIRQIEHNMLDSVTLRGVKGIRRVFMVEHDKPMIDAA
GELQPRSAKEWVLETDGVNLKSVLSVDGIDFTRTYSNKCPEVFEVLGIEAARAAILRELR
NVIEFDGSYVNYRHLALLTDLMTNRGTLMAITRHGINRADTGALMRCSFEETVEILMEAA
AVGEKDDCYGVAENVLFGQMAPMGTGSFDVALDVDMLKDVIVDSRLPIQNMMAAQMGGGA
TPAGGLAMTPYDSASPMQAEAWRTEGAAFSPLATNADEASGGFSFIPFGQSPMGPDSRFG
GYSPSSPGYSPTSPFMPTSPMVAATSPYGASPFGATSPYATSPAYSPTSPNMNLTSPQYS
PTSPQYSPTSPTYSPTSPTYSPTSPRYYSTSPSFSPASPRYSPTSPRYSPTSPMQASPTS
PKMTSPRYSPTSPTYSPASPAYTPVSPAYSPTSPVWSPRSPAPGDSNNQNQQNQTNGQTS
PWGNTATYQASPSWK
NT seq 4908 nt   +upstreamnt  +downstreamnt
atgcagaacgatacccagtttgctgagaagatccgacacgtccgggaccccaagaagcgc
atggcgctcgtctgggcccactgcaagggcaaaatgatctgcgaggccgacgagaccaag
gacgatgaaggtgcagctgcccaacctgccaaggtcggacacggagggtgcggtcatgta
caaccgctcatccgtaaggagggcctcaagcttttcctcgtttataaaaagggccgcgcc
gacgatgaggaaatggacggtcgcacgtctcaacccgagaagcgattgtaccctgcatcg
gacgtgtacaacactctcaagaagattcctgattcggaccttgcactcttgggtctttct
gaagagtttgcgcgtcctgattggatgatcttgaccgtgcttcctgttccacctccacct
gtccgtccgagtatctctgccgatggaggaactgtccgctctgaagacgacttgacgtac
aagcttggtgacattctcaaagcgtccatcaacgtccgacggtgcgaagaggagggatct
cctgcgcatgtcatttccgagtttgaacagctgcttcagtttcatgttgcgacatacatg
gataacgatattgccggtatcccgcaagcacttcagaaatccggtcgtcctgtcaaggcg
attcgtgcgcgattaaagggtaaagaaggccgtcttcgtggaaatttgatgggaaaacgt
gtcgacttttcggctcgtactgtcattactggcgatccgaacttgatgttggacgaggtc
ggagtgccaaggagtatggctatgaatttgacttatcctgagcgagtaaccccgtataac
attgagtggcttcaaatgctcgtccgaaatgggccgcgagaatatcccggtgcacgctat
gttgttcgtgacagcggcgagcgtatcgatttgaggtacaacaagcgcgcggatacgtca
ttgcaatatggatggatcgtggagcgacacttgaagaatggagactacgtgctgtttaat
cgacagcctagtttgcacaagatgagtatgatgagtcatcgtgttaagattatgccttat
tcaacattccgactcaatctttccgtcactcctccctacaacgccgactttgatggtgat
gagatgaacatgcatatccctcagagcgaagagactcgagccgaacttagtcagattgct
tgggtgccccgtcagattatctcccctcaagcgaacaaacccgtcatgggtattgtgcag
gacacgctttgcggtatccgaaagattaccctcagggataacttcctcgactggaacttt
gttcagaacatcctcctttgggtccccgaatgggacggccaagttccggtcccgactatc
ttgaaacctaaacccctttggacaggaaagcaaatcttgagtttgtgtattccctcgggt
atcaacgttttccgtgcacctgacaaggataaacgcaccaaccgagttcctgcaaacccc
gcaaacgacgatggtatttgcatcgaaaacggagaaattctttacggtgtagtcgagaag
aagactgtcggtgcttcccaagccggtctcatccacatcacgttccgtgaaaaggggccc
gaaattacgcgcgatttgttcacctcgcttcaaaaggtggtcaacttttggctccttcac
aatgggttcagtatcggtatcggcgacacgattgcagacaaggataccatgtccaagatc
actattcacatcgagacggccaagaacaacgtgctccagctgattcaaaaggcgcagtac
gatggtcttagggccgagccgggtatgactatccgagagtcattcgagagtcacgtcaat
cgagaattgaacatggctcgtgacaagacgggtaaagatgctcaagacagtctcaagaac
gataacaacgtcaagcaaatggtcgtcgcaggctccaagggatctttcattaacatctcc
caaatgtccggttgtgtcggccaacaatccgtcgaaggaaagcgtattccgttcggattc
aagcatcgcacgctgcctcatttcaacaaggacgactactgcgccgagtccagagggttc
gtcgagaattcctatctccgtgggttgactccccaagagttctttttccacgccatggct
ggtcgtgaaggtttgatcgacacggccgtcaagactgccgaaactgggtatatccaacgt
cgattggtcaaggctatggaagatattgccgtctgctacgatggaaccgtccgaaattcg
ctgggtgatattgtccaattcgcgtatggcgaggacggaatggatggcgcctttatcgaa
cgacaatccgtcgagccttaccgcctctcgaaccgcgcgtttgagcgcaaataccgcgtt
gacgtgcttgaagctggaagcggcttttcgccaggcactctccaagtcggactcgatgcc
tcttcgcccgaactgcaatacaagctcgacaatgagtacgcccaactcgtcaaggaccga
aagatgctccgagagtttatcttcaagactgcggaccctaaccaaccccattacctcccc
gttaacctccgtcgtgttatccagaacgcgcaacagattttccacattgaccgacgcaag
ccaagtgatcttgagcctgcgtatatcatggatgaggtttcaggacttagttcgcgatta
atcgtcgtgcgaggcgaagatcctatcagtctcgaggcccaagataacgcgacgatgctt
ttcaacatgcaccttcgctccacattcgccactcgccccgtcctcgaagaacttcgcctg
acaaaacaggcgtttgactggatcattggtgaagtcgagaccaagttcaacgcgtcgatt
gtcaaccccggagaaatgtgcggtaccctcgctgcccaatctatcggagaaccggctacg
cagatgacgctcaacactttccattatgctggtgtgtcgagtaagaacgtcacgcttggt
gtgcctcgtttgaaggaaatcatcaacgtcgcaacgaacatcaagaccccttcgcttacg
gtgtacctccagtccgagtatgcttcgagcaaacacaaggccaagacgatccagactgag
cttgctcatactacgcttcgtactattaccgccacgaccgaaatcgtttatgatcccgat
cccaccaacactatcattgacgaggatcgcgatttcgtcgagaccttctttgccatcccc
gacgagagtgtcgagcggacgttgtctcagcaatccccatgggttcttcgtatccaactt
gaccgtgccaaggtcctcgataagaaactcgacatggcctacattgccgatcgcattgaa
caggcattctacccggatatgaaagttattccttccgatgacaacgccgagaagcttatc
ctccgctgccgacctatcgtcatgcaagacaaggacgaagaagcattcgaaaataccgaa
gaagatatcttcatccgtcagattgaacataacatgctcgactcggtcacgctccgtggt
gtcaagggcattcgtcgtgtgttcatggtcgagcatgataagcctatgatcgacgctgct
ggagagctgcaaccacgttcggccaaggagtgggtcctcgaaaccgatggcgtaaacttg
aagagtgtgctcagcgtcgacggcattgactttacacgtacttactccaacaagtgccct
gaggtgttcgaggttctgggtatcgaggctgcgcgagctgccatcttgagagaactgcgc
aacgttatcgagtttgatggttcttacgtcaattaccgacacttggcgctcctcaccgac
ctgatgacgaaccgtggcacgctgatggctattactcgacacggtattaaccgagcagat
acgggtgctctcatgcgttgctcgttcgaagaaactgtcgaaatcctgatggaggccgct
gcagttggtgaaaaggacgattgttatggtgttgcagagaacgtattgtttggacaaatg
gcgccgatgggaacgggctctttcgatgttgcgctcgatgtagacatgctcaaagacgtc
attgttgactcgcgactgccgatccaaaacatgatggcggctcaaatgggcggaggagcg
accccggctggaggcctggccatgacaccgtacgattccgcgtcccctatgcaggccgag
gcgtggagaaccgagggtgcagcgttctcgcctttggcaaccaacgctgacgaagcatcg
ggcggtttctcatttattccatttggtcaaagtccaatgggtccagattcgcggttcggt
ggttactctccttcttctcctgggtactctcctacttctccgtttatgccaacttcgccg
atggtcgcagccacttctccttatggtgcctcaccgtttggcgcaacgtcgccgtatgca
acgtcgccagcgtactccccaacatcaccaaacatgaacctcacgtcgccacagtacagc
cctacttcgccacagtactctccaacatcacctacttacagtcctacttctccaacatat
tctcccacttcaccacgttattacagcacatcaccgagcttcagtcctgcgtcaccccgt
tactccccaacttcgcctcgttacagtcctacttctcccatgcaagcttcgcctacatcg
ccaaagatgacatcgccgcgatactcaccaacatcgccgacgtacagccctgcgtctccg
gcttatactccagtatcgccagcttacagccctacctctcctgtttggtcgccacgatct
cccgcacctggagattccaataaccagaaccagcagaaccagacgaatgggcagacatct
ccttggggtaacacggcaacttaccaagcgtcgccgtcatggaagtag

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