Rhizoctonia solani: RhiXN_03964
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Entry
RhiXN_03964 CDS
T09256
Name
(RefSeq) DNA-directed RNA polymerase III subunit C6
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RhiXN_03964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_03964
Enzymes [BR:
rsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RhiXN_03964
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
RhiXN_03964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
UnbV_ASPIC
Motif
Other DBs
NCBI-GeneID:
67026244
NCBI-ProteinID:
XP_043176200
LinkDB
All DBs
Position
1:join(1461333..1461627,1461682..1461767,1461818..1461937,1461992..1462605,1462660..1462865,1462920..1463168,1463223..1463776,1463834..1463860,1463916..1464432,1464495..1464780,1464830..1465058,1465116..1465592)
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AA seq
1219 aa
AA seq
DB search
MPSVASTSTSGFDTLRREDAFRNPSKTANEVPILQELVAPHIESFNALFDDSNLTLEDGD
GKGLLSLGIKDIGSKVVFDGSGTLGESSGAAGWGNRLSIRISDIAIGRPMVSDKDRNVVE
RQVYPSEARERLTSYRGKLTVKLAWSVNGGPEHEESRDCGLLPIMVRSNRCNLRGLSSAQ
LVQKHEEPEEFGGYFIINGNERLIRYLILPRRNHVISIIRNSFMNRGPSFTPYGVAIRCV
RPDQTSVTNSLNYLSNGSAMLRFSWRKQEYMIPVMLILKALVSASDREIFEGVMMKDYDN
TFLTDRMELLLRSFKAFNLHTGDQCLEYLGDKFRVVLGQPEDHDNMTLGHWLIEKIILVH
LDSPRDKFRMLLFMLRKLFALVSGECAADNPDSPQHQEVLLPGFLYGMIIKERLDEALNQ
VRAQIAQDIRRKVPGVDFMDNRYINKVVQRSNFEIGARLANFLATGNLVSPTGLDLQQAA
GFTIVAEKLNWYRYISHFRCIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGAPCGLL
NHLSRSCRIVTRELDTKSIPSLLSSLGMTQPFSPSVSGKVNICVQLDGRIIGWASPTLAK
RMANALRVWKTEGTNRVPMDLEIGYVPPSNGGQYPGLYLFSSRSRMMRPVRYLANGKDDS
IGSFEQVYMDVAIRPEEIEENVSTHVEIEPTNFMSILANLTPFSDFNQSPRNIYQCQMGK
QTMGTPATALRHRTDNKLYRLQSGQTPIVRPALHNTYGMDSFPNGTNAVVAVISYTGYDM
EDAMILNKSAHERGFGYGTIYKSLIVDLADQRGASRSTTQPNLHFGLGRDVKVDDSRKAV
VDDDGFPFKGAKVQPGGVIAAYIDDTTGRTCWIKYKGDETAYIEEVRILGSDLGDTEARK
IQVTLRITRSPVIGDKFSSRHGQKGVCSQKWPAIDMPFSESGMQPDVIINPHAFPSRMTI
GMFVESMAGKAGAMHGLAQDATPFKFNEEDTAISYFGEQLKAAGYNYYGNEPMYSGITGQ
EFAADIYLGVVYYQRLRHMVDDKFQVRTTGPVDSVTRQPVKGRKRAGGIRFGEMERDALI
AHGTSFLLQDRLMNCSDYSTAWVCRTCGSLITLGYDDVRLGETVMGREQPKPTGPGGEYC
RVCRAEAEEEERLARSELQNGSAPRPSPHEVRVALPTQNVIGRGSKGGDMDAVAIPFVFR
YLCAELAAMGIAVSVEVGQ
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgtcgcatcgacctcgacttcaggtttcgacacgctccgacgagaggatgca
ttccgaaatccttctaaaacagctaatgaagtgccgattctacaagagctcgtagcgcct
catatcgagtctttcaatgctctgtttgacgactctaatttaacactcgaggatggagac
ggaaaagggttattatcactaggaataaaagatatcgggtccaaggtcgtgttcgacgga
agtggaacgctcggagaatccagtggtgccgccgggtgggggaaccggttgtccatacgg
atcagtgatattgcgatcggacgtcctatggtatcagacaaggataggaacgttgtcgag
cgtcaagtttatccgtccgaggctcgtgaacggctaacgtcctaccgagggaaattgacc
gtaaaattggcatggtcagtcaacggagggccagaacatgaagagtccagggattgtggt
ttactacctatcatggtcagatcaaaccggtgcaaccttcgaggtctcagctctgctcaa
ctcgtacaaaagcacgaagaaccagaagaattcggagggtattttattatcaacggaaac
gaacggttaatccggtacctcatccttcctcgacgaaaccatgttatttcgatcattcga
aattcgtttatgaaccgaggaccttcgttcacaccctacggtgtcgcgatacgctgtgtc
agaccagaccaaacctctgtcactaactcactaaactacctctcgaacggatcagcgatg
ttgagatttagttggaggaaacaagagtatatgatccccgttatgctcatccttaaagcg
cttgtcagtgcatctgatagagaaatcttcgagggagttatgatgaaggattacgacaat
actttcttgacggatcgcatggagctcttgctaaggagtttcaaggcatttaatttacat
actggagaccagtgtttggagtacttgggtgacaagttccgagttgtgcttggccaacca
gaagaccacgataacatgactctcggacattggttgatcgagaagattatcttggtgcac
ctagattcaccaagagacaagttccgaatgctactgttcatgctacggaaactctttgct
cttgtttctggagaatgcgcggcagataatcctgattcgccccagcatcaagaagttctc
ttgcctggatttctctatggaatgatcattaaggagcgcttggacgaggcattgaaccaa
gttcgggctcagattgcacaagatatacgcagaaaggttcctggtgttgactttatggac
aatcgttatatcaacaaggttgtgcaacgtagcaacttcgagattggagcgcggctggcc
aactttttggctacaggcaacttggtctcgcccaccggattggacctgcaacaggctgca
ggttttacgattgttgctgaaaagctcaactggtaccgatatatcagtcatttcagatgc
atacatcgaggcgcgttcttcgccgagctcaagacaacgacagttcgaaaattgttgccc
gaggcatggggcttcttatgccccgtacacacacctgatggtgctccctgtggtctactc
aatcacctctctcgatcatgtcgaatagtcacgcgggagctcgacacaaaatctatacct
agccttctatcttccctggggatgacccaacctttctcgccttccgtctctggaaaagtc
aatatatgcgttcaacttgatgggcgaatcatcggttgggcgtcgcccacactggcaaaa
cgtatggctaacgccttgcgagtctggaaaactgaaggaacgaaccgtgtccctatggat
ttggaaatcggatacgtcccgccctcgaacggcgggcaatatcctggattatatctgttt
tcttcaaggtcaaggatgatgcgtcccgttcggtacttggccaacgggaaagacgattca
attgggtcatttgaacaggtctatatggatgttgcaattcgtcctgaggagattgaagag
aacgtatccacgcatgtggagattgagccaaccaactttatgtccatcctggctaacttg
acgccgttttcagatttcaatcagagccctcgtaatatctaccaatgtcaaatgggtaaa
caaacaatgggcacaccggcaacagcactccgacatcgaacagacaacaagctctacaga
ctccaaagcgggcaaacgcctatcgtccgaccagcgcttcacaatacatacggaatggat
tcgttccccaacggaacaaacgccgtcgtcgcagtcatttcatacacaggctatgacatg
gaagacgccatgattctaaataaatctgcccacgagaggggtttcgggtatgggacaata
tacaagtcgcttattgttgatctggcggaccaaaggggtgcttcgaggtcgacaacccag
cccaatttgcactttggtttaggaagggatgtcaaagtagatgattcccgaaaagctgtc
gtggacgatgatggattcccattcaagggcgcgaaagtacagcctggtggcgttattgcc
gcatacattgatgacactactgggaggacatgctggatcaagtataagggcgatgaaact
gcatatattgaagaagttcgaattctaggtagcgacttaggagatacggaggcacgcaag
atccaggtcacgctccgtattacccgttcgcccgttattggtgataaattttcgtcccga
cacggacaaaagggtgtatgctctcagaaatggcctgccattgatatgccatttagcgag
agtgggatgcagccagatgtcatcatcaaccctcacgctttcccatctcgtatgacaatt
ggtatgtttgtggagagtatggctggaaaagcgggcgccatgcatggactagcacaggat
gctacaccattcaagttcaacgaggaagacactgcaatctcctactttggggaacaactc
aaagctgctgggtacaactactacggaaacgaacccatgtactcagggattactggccaa
gaatttgcagcagacatctacctgggagtcgtttactaccagcgtctccgacacatggta
gacgacaaattccaagtacgaaccacaggccctgtagattctgttactcgccaaccggtc
aaggggcgaaaacgtgctggaggcattcggttcggagaaatggagcgcgacgcgcttatt
gcacatgggacatctttcctgctccaagaccgcttgatgaactgctccgattattcgacg
gcttgggtatgccgtacatgcggcagtctcatcacgcttgggtacgatgatgtacgactg
ggcgagacagttatgggaagggagcaacccaagccaactgggccaggcggagagtattgt
cgagtgtgtcgggccgaggctgaagaggaagagcgactagcgaggtctgaactgcaaaac
ggctcagctccacggccttcaccccatgaagtacgcgttgcgctacctacccaaaatgtg
attggaaggggctccaagggaggggacatggatgccgttgccattccattcgtctttaga
tatctgtgtgcggagcttgctgcgatgggtattgcggtgtcggttgaagtagggcagtag
DBGET
integrated database retrieval system
