Raphanus sativus (radish): 108805431
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Entry
108805431 CDS
T06014
Name
(RefSeq) biotin--protein ligase 1, chloroplastic isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00780
Biotin metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
108805431
Enzymes [BR:
rsz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
108805431
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
108805431
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
108805431
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
108805431
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GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
Condensin2nSMC
BPL_LplA_LipB_2
DUF366
Motif
Other DBs
NCBI-GeneID:
108805431
NCBI-ProteinID:
XP_018432987
UniProt:
A0A6J0JBI7
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Position
1:complement(22999402..23003634)
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AA seq
332 aa
AA seq
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MDGDDSCSLVLCGKSSVENDTAKRLKNENLLKLPDDTSKVSLFLASEIKNLVRDYDDDDS
FNLPLFMNSLSTSRFGRFLIWSPRLSSTHDLVSHNFSELPVGSVCVSDIQFKGRGRTMNI
WESPKGCLMYSFTVEMEDGRIVPLIQYVVSLAVTEAVKDVCDNKGLPYIDVKIKWPNDLY
LNDLKVGGILCTSTYRSRKFHVSVGVGLNVDNDQPTTCLNAVLKDISPASILLKREEIIA
AFFHKFEKFFDLFIDQGFKSLEELYYRTWLHSGQRVIIEDKIEDQVVQNIVTIQGLTSSG
YLLAIGDDYQMYELHPDGNSFDFFKGLVRRKI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgatgattcgtgtagcttggttttgtgtgggaagtcctctgttgagaatgat
acagcaaagcgtttgaagaacgagaacttgcttaagctcccagatgatacttctaaagtt
tcactctttttagcttccgagatcaagaatttggttagagattatgatgatgatgattca
ttcaatcttccactcttcatgaactcgctttcaacttctcggttcggtcggtttctcatt
tggtctccccgcttgtcttccactcacgatcttgtttctcataacttttctgagcttccg
gttggttcagtttgcgtctcagatattcagtttaagggtagaggcagaacaatgaatatc
tgggaatctccaaagggttgtcttatgtattcttttacggtagaaatggaagatggtcga
atcgtgcctttgattcaatatgttgtatctcttgctgttactgaggctgtgaaagatgtt
tgtgacaacaagggtttgccgtatatagatgttaaaataaagtggcccaatgatctttac
ttgaatgacctgaaagtcggaggcattttgtgtacctctacctacagatctagaaaattt
cacgttagtgttggtgtgggattgaatgtggacaatgatcaaccgaccacatgcttaaac
gctgtattaaaagacatatctcctgcatcaattctacttaaaagagaagaaattattgct
gccttctttcataaattcgagaaattctttgatctgttcattgaccaaggttttaaatct
ctcgaggagctttactacaggacatggcttcacagcgggcaaagagtgatcattgaagat
aaaatcgaggaccaagttgttcaaaacattgtgactatccagggtttgacatcttctgga
tatcttctggctattggagatgattatcaaatgtatgagcttcaccctgatggcaatagt
tttgactttttcaaaggtctagtccgaagaaaaatctga
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