Raphanus sativus (radish): 108805678
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Entry
108805678 CDS
T06014
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03020
RNA polymerase
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108805678
09124 Replication and repair
03420 Nucleotide excision repair
108805678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108805678
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108805678
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108805678
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108805678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
108805678
NCBI-ProteinID:
XP_018433116
UniProt:
A0A6J0JDK4
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Position
6:complement(28035547..28037175)
Genome browser
AA seq
320 aa
AA seq
DB search
MDSGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCITDQTLD
VTSRDLYSADPTVTTVDFGLDSSGADSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAK
WSPAATVTFMYEPDIVINEDMMDTLTDEEKIDLIESSPTKVFDFDAVTRQVVVVDPEAYT
YDEEVIKKAEAMGKPGLIEIRPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLS
DDTVEADDQFGELGAHMRGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtgccacttaccagagattcccaaaggtgaagatccgtgagctaaaagat
gactacgccaagttcgagcttcgcgacaccgatgtttccatggcgaacgctctccgtcgc
gttatgatctccgaagtccccacggtcgcaatcgatctggtcgaaatcgaggttaattcc
tctgttctcaacgacgagttcatcgctcatcgattaggtctaatccctctcactagcgaa
cgtgcgatgagcatgcgcttctctcgagactgcgatgcttgcgatggagatggacagtgc
gagttttgctctgttgagtttcatcttagagctaaatgtatcactgaccaaaccctagat
gttactagtagggatctctacagtgctgatcctactgtcactactgttgatttcggtctc
gattcatctggagctgactcaagcgagcaaaggggcattatcatagtcaaactgagacgt
ggacaagaactgaagcttagggcgatagcaaggaaaggaatcgggaaagatcacgctaaa
tggtctcctgcagccactgttacgttcatgtatgagcctgacattgttatcaatgaagat
atgatggacactttgactgacgaggaaaagattgacttgattgagagcagcccaaccaaa
gtttttgactttgatgcagtcaccagacaggttgtggtggtcgacccagaagcatacact
tacgatgaagaagtgatcaagaaagcagaagccatggggaaaccagggctcattgagatc
cgtccgaaagatgacagttttatattcactgttgaatccacaggtgcagtgaaggcttcg
cagctggtactaaatgccatagatctcctgaagcagaagctcgatgcagtccgtctctca
gacgacactgttgaagctgatgatcagtttggcgaactaggtgcacatatgcgtggagga
tga
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