Raphanus sativus (radish): 108806227
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Entry
108806227 CDS
T06014
Name
(RefSeq) biotin carboxylase, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00620
Pyruvate metabolism
rsz00640
Propanoate metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
rsz01212
Fatty acid metabolism
Module
rsz_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
108806227
00640 Propanoate metabolism
108806227
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108806227
Enzymes [BR:
rsz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
108806227
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
108806227
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
108806227
NCBI-ProteinID:
XP_018433783
UniProt:
A0A6J0JDT7
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Position
1:4470073..4474175
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AA seq
535 aa
AA seq
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MDASMITNCKSTASSLPSLFLGRSGGSLRSSQCNVMMGKTVSFPSQKTQTLKVSRKNVIR
RCGALGATCSSGDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVC
IGEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLSENALFVEMCREHRINFIGPNPDSI
RVMGDKSTARETMKNAGVPTVPGSDGLLKSTEEGVRLADEIGFPVMIKATAGGGGRGMRL
ANEPSEFVKLLQAAKSEAAAAFGNDGVYLEKYVQNPRHIEFQILADKFGNVVHFGERDCS
IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYVGVGTVEFLLDERGSFYFMEMN
TRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYTQEDIVLRGHSIECRINAEDPFKGFRP
GPGRITSYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDT
IITGVPTTIEYHKLILEVEDFKNGKVDTAFIPKHEEELAEPHEIVLVKDLTNAAA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcaatgattactaattgcaaatccaccgcgtcctcccttccctctttgttc
cttgggaggtcgggaggtagtcttagaagttcccagtgtaatgtcatgatggggaaaacg
gttagcttcccgagccaaaagactcagactttgaaggttagccggaagaacgtgattagg
aggtgtggtgcgcttggtgctacatgcagcagtggggataagattcttgtggctaacaga
ggtgaaattgctgtccgtgtgatccgaactgctcatgaaatgggcattccctgtgttgct
gtttactccactattgacaaggatgcattgcatgtcaagttggctgatgaagctgtttgt
attggtgaagctcctagcaaccagtcgtatttggtgataccgaatgttctgtcagctgca
atcagccgaggatgtacaatgcttcatcctggttatggattcctgtcagagaacgctctt
tttgttgagatgtgcagagagcaccggatcaactttattggaccaaatcctgatagcatc
cgtgtcatgggtgacaaatcaactgccagagagacgatgaagaatgcaggtgtcccaact
gtaccagggagtgatggactattgaagagcacagaagaaggagtcaggctcgccgatgag
attgggtttcctgtaatgatcaaggcaacagctggtggtggtggacgtggaatgcgtctt
gctaatgaaccctcagagtttgtgaaactgctgcaggcagcaaagagtgaggccgctgct
gcttttggaaatgatggagtttatctggagaagtacgtgcaaaatccccggcatattgag
ttccagattcttgcagataaatttggaaatgttgttcacttcggcgagcgtgactgcagc
atccagagacgtaaccaaaagttgctggaagaagcaccttcccctgcactgacccctgag
ttgcgaaaagccatgggtgatgcagctgttgcagcagcagcgtccattggttacgttggt
gttggtaccgtggagttccttttggatgagagaggttccttctatttcatggaaatgaat
actagaatccaggtggagcatcctgtgacggagatgatttactccgttgatttgattgaa
gaacagattcgtgttgctatgggagagaaactgcgttatacacaggaggatattgtgctt
agaggacactctattgaatgtcgtatcaatgcagaggacccattcaaaggattcagacct
ggacctggaagaataacatcatatctgccatctggaggtccttttgtcagaatggatagc
catgtgtatcccgactatgttgttcctccaagctatgattctcttcttggaaagcttatt
gtatgggctccaacgagggaaagggcaattgagcggatgaaacgtgcactcaatgacact
attattacaggggttcccactaccattgagtaccacaaacttatccttgaagttgaggat
ttcaagaacggaaaagttgatacagcattcatccccaagcatgaagaagaattagcagag
cctcatgaaattgtgctagtgaaagatttgacaaatgcagctgcttag
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