Raphanus sativus (radish): 108808745
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Entry
108808745 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00900
Terpenoid backbone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108808745
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rsz01006
]
108808745
Enzymes [BR:
rsz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108808745
Prenyltransferases [BR:
rsz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108808745
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GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
108808745
NCBI-ProteinID:
XP_056844554
UniProt:
A0A9W3BZ53
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Position
6:48518975..48522037
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AA seq
266 aa
AA seq
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MATALNVRVPEEALTAAESVADIVPSSELRVRQRGIAEITEMIHVAGLLHDDVLDDANTR
RGVGSLNFVMGNKISVLAGDFLLSRACVALAAXKNTEVVSLLATVVEHLVTGETMLMTST
TDQRHSMDYYMQKTFYKSASLISNSCKAIALLAGQSAQVAMLASEYGRNLGLAYQLIDDV
LDFTGTSASLGKGSLSDIRQGIITAPILFAMEEFPQLRTVVDQLEKDPTSVDIALRVSWE
EQWNTKDKRIGCRACECGSSSNRVST
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagctctgaatgtacgcgtaccagaagaagcattgactgctgctgaatcagta
gcagatattgttccatcatcagaattacgtgtaaggcaacggggtattgctgaaatcacc
gaaatgatacatgttgcaggcctcctgcacgatgatgtcttggatgatgcgaatacaagg
cgtggtgttggttccttaaactttgttatgggtaacaagatatcagtattagcaggagac
ttcttgctctctcgggcttgtgtggctcttgctgctnctaaaaacacagaggttgtatcg
ttacttgcaactgtggtagagcatcttgttactggtgaaaccatgctaatgactagcaca
accgatcagcgtcatagcatggactactacatgcagaagacattttataagtcggcctca
ctaatctcaaatagctgcaaagcaattgcgttactagctggacaatcagcacaagtcgcc
atgttagcttctgaatacgggaggaatctgggattggcataccaattgatagacgacgtt
cttgacttcacgggcacatctgcttctctcggaaagggatcgttatctgatatacgccag
gggatcatcacagctccaatactctttgccatggaggagtttcctcaactacgcacagtt
gttgatcagcttgaaaaagatccaacaagcgttgacattgcgttaagagtatcttgggaa
gagcaatggaatacaaaggacaagagaattggctgtagagcatgcgaatgtggcagcagc
agcaatagggtctctacctga
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