Raphanus sativus (radish): 108809849
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Entry
108809849 CDS
T06014
Name
(RefSeq) ABC transporter B family member 5
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108809849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108809849
04147 Exosome [BR:
rsz04147
]
108809849
04090 CD molecules [BR:
rsz04090
]
108809849
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108809849
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108809849
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108809849
CD molecules [BR:
rsz04090
]
Proteins
108809849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
Zeta_toxin
AAA_16
AAA_21
RsgA_GTPase
AAA_15
AAA_30
AAA_25
nSTAND1
SbcC_Walker_B
DUF815
EVC2_like
Motif
Other DBs
NCBI-GeneID:
108809849
NCBI-ProteinID:
XP_018437487
UniProt:
A0A6J0JP94
LinkDB
All DBs
Position
6:25559622..25565206
Genome browser
AA seq
1236 aa
AA seq
DB search
MKQGRIEENAKTVPFYKLFSFSDSTDVLLMIVGSIGAIGNGLGFPLMTLLFGDLIDTVGR
NLFTDDIVELISKICLKFVYLGLGTFVAAFLQVSCWVITGERQAARIRSLYLKTILRQDI
VFFDVETTTGEVVGRMSGDTVLILDAMGEKVGKFIQLLTTFLGGYALAFVKGWLLTLVML
TSIPLLAMAGAATSVIFTKASSQQQAAYAKASTIVEQTCGSIRTVASFTGEKQATSGYKE
LINSAYKSSVKQGFSEGLGFGVMFLVFFCSYALAIWFGGEMILRKGYTGGAVINVMIIVV
TSSMSLGQAAPCLTSFAAGQAAAYKMFETIKRKPVIDSFDLNGKVLEDIQGEIELRDVCF
SYPARPREEVFGGFSLIIPSGTTAALVGESGSGKSTVISLIERFYDPNSGQVLIDGVDLK
EFQLKWIRGKIGLVSQEPVLFSSSIMENIGYGKEGATVQEIEAAAKLANAAKFIDKLPRG
LETMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMVN
RTTVIVAHRLSTVRNADMIAVLHRGKIVEEGSHLELLKDHEGAYSQLIRLQEINTESKQL
EISNGQQDGSIRNGPSRGNSGSRMHGDDDESVSVLGLLAGQENTEIPKDMPQDVSITRIA
ALNKPEALILVLGTLVSALDGAIFPIFGLFFAKVIIAFFQPPHELRSDSRFWSIIFVLLG
VLSLVVYPTHMSLFAVAGGRLIRRIRSMCFEKVVHMEVGWFDEPENSSGALGARLSADAA
LIRTLVGDSLALTVKNVASAVAGMIIAFVISWELAVIILVLIPLTGINNYVQVKFMKGFS
ADAKTKYEEASQVANDAVGSIRTVASFCAEEKVIDMYKKRCEDSIKSGMKQGLVAGLGFG
LSFFVLYSVYAACFYAGARLVKDGRTTYNGVFQVFLALTMTTIGISAASSFAPDSSKAKS
AAASIFGIIDRKSKIDSRDESGVVLDNVKGDIEFCHISFAYQTRPDIQIFRDLCFSIRAG
KTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEPVLF
NDTIRANIAYGKGGEEATEAEIVAASELSNAHKFISSIQRGYDTVVGERGIQLSGGQKQR
VAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVI
AVVKNGVIAEKGTHETLMKIEGGVYASLVQLHMSAF
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggggagaattgaagaaaatgcaaagaccgtaccattctacaaactgttttct
ttctcagattctaccgatgtgttgttgatgatcgttggttcgatcggagctatcggaaac
ggtcttggctttccgttgatgacattattgtttggtgatcttattgatacggttggtcga
aacctattcacagacgacattgttgagttaatctccaagatttgtttgaaatttgtctac
cttggacttgggacatttgtagcagcctttcttcaggtgtcttgttgggtgattactgga
gaaagacaggctgcaaggataagaagtttatatctgaagacaattctaagacaagacatt
gtattcttcgatgtcgaaacaaccacaggagaagtagttggtcgaatgtcaggtgatact
gttcttatactagatgctatgggcgagaaggttgggaagtttatacagttgctaacaaca
ttcttgggtggatatgctttagcgttcgtgaaaggatggttacttacacttgttatgttg
acatcaattcctcttctagctatggctggtgcagctacgtcggttatttttactaaagct
tcttctcaacaacaagctgcttatgccaaagcttcaactattgttgaacaaacttgcggg
tctattcgaaccgttgcttcattcacgggagagaagcaggcgacgagtggctacaaagag
ttgataaactcagcctataaatcgagtgtcaagcaaggtttctctgagggtttagggttt
ggagtgatgttcttggtgttcttttgtagctatgctttggctatatggtttggtggagaa
atgatactcagaaaaggatatacaggtggtgcagtgattaatgtaatgatcattgtggtc
acaagttcgatgtctttagggcaagcagcaccatgtctaacctcatttgcagctggtcaa
gctgcagcttataaaatgtttgaaacaataaaaagaaagccggtgattgattcttttgat
ctaaacgggaaggttttagaagatatacaaggcgaaatagagctgagagatgtgtgtttt
agttaccctgcaaggcctagagaagaggtttttggaggattctctctgataatcccaagt
ggcacaaccgctgctttggtaggagaaagcgggagcggaaaatctactgtgatcagttta
atagaaaggttctatgatccaaattccggccaagtgcttattgatggtgttgacttgaag
gagtttcagctgaaatggattagaggaaagattggattggttagtcaagaaccggttctg
ttttcttcaagtataatggagaatattgggtacgggaaagagggagcgacggtccaagag
attgaagcagctgcgaagctagcgaacgcggctaagttcatcgataagttgcctcggggt
ttagagacaatggtaggtgaacatggaactcagctctcaggaggacagaaacagaggatt
gcaatcgctagggccatacttaaagatccacggattttgctgttagatgaggcgacaagc
gctcttgatgcagaatccgaacgagtggttcaagaagctttagatagggtgatggttaac
cggactactgtgattgtcgctcatcggttaagcacagtgagaaatgctgatatgattgct
gttcttcaccgtggaaagattgttgaagaaggttcacatttggagctactcaaggatcat
gaaggagcttattcacagcttatacggctacaagagataaacacagaatcaaaacaacta
gagatttcaaatggacagcaagacggatctatcaggaatggaccatccagaggaaacagt
ggcagtaggatgcatggtgatgatgatgaatctgtttccgttcttggcttacttgcagga
caagaaaacactgaaattcctaaagatatgccccaagatgtctcgattactcgaattgct
gctcttaacaaaccggaggctctgattctcgtacttggaaccttagtatctgcacttgat
ggtgctatattcccgatctttggacttttttttgctaaagttatcatagcattcttccaa
ccgcctcatgagctgaggagcgattcgagattctggtcgataatatttgtgcttcttggt
gtgctctctttggtagtgtatccaacgcatatgtccttgtttgctgtagctggagggaga
ctgattcgtaggataagatcaatgtgtttcgagaaagttgttcacatggaggttgggtgg
tttgatgagcccgagaactcgagtggtgccttgggagcaaggctctctgctgatgcagcc
ttgatcaggacacttgtgggcgactctttggctctaactgtcaagaacgttgcatccgca
gtggcgggaatgatcatagcttttgtgattagctgggagttagctgttattatcttagta
ttgattcctttgacaggaatcaataattacgttcaggttaagttcatgaaaggcttcagt
gccgacgcaaagacgaagtacgaggaggcgagtcaagtggcgaacgatgcggttgggagt
ataagaacggttgcgtctttctgtgcggaggagaaagtgatagatatgtataagaaacga
tgtgaagattcgatcaaatcgggaatgaagcaaggactagtcgcaggattagggtttggt
ctctccttcttcgttctttactctgtctacgctgcttgtttctacgcaggtgctagattg
gttaaagacggaaggacgacatacaacggtgtttttcaggttttcttagcattgacaatg
acaacaattgggatatctgcggcgagttcattcgctcctgattcaagcaaagctaagagt
gctgctgcttcaatttttggtatcatcgataggaaatcaaagatagactcgagagatgaa
tcaggggtggtgttggacaatgtaaagggagatatcgagttttgccacataagctttgct
taccaaactagacctgatattcagatttttcgtgacctttgtttctccattcgtgccgga
aagactgttgctttggtcggagaaagtggatcaggcaaatcaacggtgatatccctgtta
cagagattttacgatccggattccggtcatatcactttagacggagttgagctcaagaag
ctgcaactgaaatggctgagacaacaaatggggcttgtagggcaagagcctgtactgttc
aacgacacaatacgagccaacattgcttatggaaagggaggagaagaagcaaccgaggct
gagatcgtagctgcctctgagctctctaatgctcataaattcatctctagtatacaacgg
ggctacgatacggtggttggggagagagggatacagctgtcaggaggacagaagcagcgt
gtggcgattgcacgtgccatcgtgaaagaaccgaagatcttgttactggacgaagcgacg
agcgcattggacgccgaatcagagcgtgtggttcaggacgcacttgaccgggtgatggtg
aaccggaccactatcgtggtggctcacaggctttcaacgatcaagaatgctgacgtcatc
gccgtagtgaagaacggtgtgatcgctgagaaagggacgcatgagacgttgatgaaaatc
gaaggtggtgtttatgcttccctcgttcagcttcacatgagtgctttctaa
DBGET
integrated database retrieval system
