Raphanus sativus (radish): 108824587
Help
Entry
108824587 CDS
T06014
Name
(RefSeq) DNA-directed RNA polymerase II subunit 7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03020
RNA polymerase
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108824587
09124 Replication and repair
03420 Nucleotide excision repair
108824587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108824587
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108824587
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108824587
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
108824587
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108824587
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108824587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
108824587
NCBI-ProteinID:
XP_056850596
UniProt:
A0A9W3CGP1
LinkDB
All DBs
Position
9:6033090..6034566
Genome browser
AA seq
180 aa
AA seq
DB search
MFFHMVLERNMQLHPRSFGLNLRENLVSKLIKDVEGSCSGRHGFVVAITGIESVGKGLVP
DGTSSSALVTFPVKYQCLLFRPFRGEILEAFVTLVNRMGFFAEAGPVQIFVSKLLIPDSM
EFQAGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTINDDFLAVINDPALAA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccacatggtattggagcgaaacatgcaactacacccacgctcctttggactt
aaccttcgtgaaaacctcgtctccaagctcatcaaagacgtcgagggcagttgcagtgga
cgacatgggtttgtagtggcgataactggaatagaaagcgtaggaaaaggattggtccct
gatggtacttcttcttctgctttagtcaccttccccgttaagtaccaatgcctccttttc
agacctttcagaggcgagatcttggaagcctttgtcactctcgtcaataggatgggattc
ttcgcggaagctggccctgttcagatttttgtgtccaaacttttgataccagacagtatg
gagtttcaagctggagacatgcctaattatacaacttcagatggatcagttaagattcag
aaagaatgtgaagtgagactaaagattattggcacaagagtcgacgccactgagattttt
tgcgtgggcaccatcaacgacgattttttggcagtcataaacgatcctgcactcgctgca
taa
DBGET
integrated database retrieval system