Raphanus sativus (radish): 108826160
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Entry
108826160 CDS
T06014
Name
(RefSeq) cyclin-dependent kinase D-1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108826160
09124 Replication and repair
03420 Nucleotide excision repair
108826160
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rsz01001
]
108826160
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108826160
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108826160
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108826160
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
108826160
2.7.11.23 [RNA-polymerase]-subunit kinase
108826160
Protein kinases [BR:
rsz01001
]
Serine/threonine kinases: CMGC group
CDK family
108826160
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108826160
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
108826160
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108826160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Haspin_kinase
Seadorna_VP7
APH
Motif
Other DBs
NCBI-GeneID:
108826160
NCBI-ProteinID:
XP_018455044
UniProt:
A0A6J0L6C2
LinkDB
All DBs
Position
9:5236698..5238723
Genome browser
AA seq
390 aa
AA seq
DB search
MDQPKKVADRYLKQEVLGQGTYGVVFKATDTKNGQTVAIKKIRLGKEKEGVNITALREIK
LLKELKHPHIIELVDAFPHKENLHLVFEFMETDLEAVIRDPNLFLSPSDVKSYLQMTLKG
LEYCHDKCVLHRDMKPNNLLIGPNGQLKLADFGLARICGSPGRKFTHQVFTRWYRAPELL
FGAKHYGSAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKEDQWPDMLSLP
DYVEYQFVPGVSLRSLFPMVSEDALDLLSKMFTYDPKSRISIHQALQHRYFTSAPSPTDP
LKLPIPVCKLDAKSSDSKLKTITVLSPAHKLRRVMPDRGKSTDVMKQASHDGQAPMSLDF
TILAERPPNRLTITSADRSNLKRKLDLDFL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggatcagccaaagaaagttgctgacaggtacctgaagcaagaagttcttggccaaggt
acttatggagtcgtcttcaaagctaccgatactaagaacggacaaactgtagcgataaag
aagataagacttggtaaagagaaagaaggtgtgaatataacagctctaagagaaatcaaa
ttactcaaagagcttaagcatcctcatattatagagttggttgatgcctttcctcacaag
gagaacttgcaccttgtgtttgagttcatggagactgacctcgaagcagtgattcgagat
cctaatctgtttctctccccctctgacgtcaaatcttacctccaaatgacattgaaaggt
cttgagtattgccatgacaaatgtgttttgcacagagatatgaagccaaacaacttgttg
ataggacccaatgggcaactaaaactcgcagactttgggctagcacgtatatgtggtagc
ccaggtcgtaagtttacacaccaggtctttactagatggtatagagcacctgagcttctc
tttggtgcaaaacattatggttctgctgttgatgtttgggctgctggctgcatcttcgcc
gagcttctactacgcagaccttttcttcaggggaacagtgatatcgatcagttaagtaaa
atctttgctgcttttgggactcctaaagaagatcagtggccagatatgttatcacttcct
gattatgtagagtatcagtttgtccctggggtgtctctacgttctttattcccaatggtt
agtgaggatgctttagatttgttgtctaagatgttcacctatgaccccaagtctagaata
tcgattcaccaggctttacaacacaggtacttcacatcagcaccttctcctactgaccca
ttaaagctaccaataccagtttgtaagctggatgctaaatcatctgacagtaaactcaaa
actattacggtgttgtcaccagcacataagcttagaagagtgatgcctgaccgaggaaag
agtacggatgtcatgaaacaagctagccatgatggacaagcacctatgtctttagatttc
accatactagctgagcggccaccaaaccgactaaccatcaccagcgcggatagatctaat
ctgaagaggaaactcgatctcgacttcctgtag
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