Raphanus sativus (radish): 108827718
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Entry
108827718 CDS
T06014
Name
(RefSeq) PWWP domain-containing protein 1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00270
Cysteine and methionine metabolism
rsz01100
Metabolic pathways
rsz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108827718
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108827718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108827718
03032 DNA replication proteins [BR:
rsz03032
]
108827718
03036 Chromosome and associated proteins [BR:
rsz03036
]
108827718
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108827718
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108827718
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108827718
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108827718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
108827718
NCBI-ProteinID:
XP_018456694
UniProt:
A0A6J0LAP6
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MDEDPEIPQQTNPIEDPEVIPTLSGDAADVDSSLDAAAASSSSPTELDSSVADDDGDGGA
RVSESERSEKKPDLTATNEEDDVSETEPRVSEIIKSEDEIDKSDDSPELHKQEDDNDDEV
GSEADDVAFEEEEKRGALEKPAVTDYKSLLSEFDDYVASEKMGSGVSRALSYGFQVGDLV
WGKVKSHPWWPGHIFNEAFASPSVRRMRRVDHVLVAFFGDSSYGWFDPAELIPFEPHLPE
KAHQTAAKHFVRAVEEAVDEASRRSALGLTCKCRNPYNFRATSVQDYFSVDVPDYEVQGV
YSWEQIKKARDEFSPAEALSFVKGLALAPRECDDDDDDESLGFLKKKAAVSAFRKAVFEE
FDETYSQAFGSKSVRASVTSNEPHNRTPSRAPLSGPLVIAETLGVPKSSKTPTKIKDSKK
QDKYLLKRRDEAGDKNVSLGQVEASSSTGVPVLPRRVSTLQSPIKDEQPGIVSMDSNSSS
TAIPGTVPKLSLDEEKDVAEESAEKTEERTVVNPEHVKSEAMAPLKQESGPEAGSSLQPL
IESPRGSTGSIIKKLKAAKRSSSEMGTENPPPSEPVKKKKKMKEPNSNLPRKRKLPLSSG
EPVAKKLSQLGSAHLHTYMEADVPKLLGHLQDLCIEPFSGSSVASFGAARKFFIRFRSLN
YQKSLSVSSSDATATALNAKDTKPGKTVNRTEDPSKAGKKRLSSDRQDEIPLVKKLKKTN
QLKPMASEKLIKREAKETIKPIREQSGAVQARPLKPQTGKKTAPSAKVVEPTMLVMKFPP
GTSLPSPALLKARFGRFGLLDQSAIRVFWKSSTCRVVFLYKADAQTAFRYATGNNSLFSN
VNVRYFLRDVDAPKAETQEPENAKEDDEPQSQVPDPASPRYQPKLPPPPKSNLKSCLKKL
GDDTSSNRPRVKFMLEGEENSSKATTNEPSNRNDGPSSSSSFGMEFVSKKFQNVVHHHHQ
QLPPPSTLPPILPLPPQYSKPIKTVDHVEPPMPPPPLPSRSFPGPSSAVGAGDISHQMLN
LLSKCNDVVANVTGLLGYVPYHPL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcctgagattccccaacaaactaatccaatcgaagatcccgaggtgatt
ccgacgctctcaggtgatgctgctgatgttgattcgagcctggatgctgcagcagcttct
tcttcttcacctacggagctcgattcatcggttgctgacgacgacggcgacggcggtgct
agggtttccgagagcgagagatcggagaagaagcctgatctcactgcgactaacgaggaa
gacgacgtaagcgaaacggagcctagggtttctgagattattaagagcgaggatgagatt
gacaagtctgatgacagtcccgagcttcataaacaagaagatgataatgatgatgaggtt
ggatccgaagctgatgacgtggcgttcgaggaagaagaaaagcgaggagctttagagaaa
ccggcggttacggattacaaatctctcttatccgagttcgacgattacgtggcgagcgag
aagatgggctccggagtgtccagagccttgagctacgggttccaagtgggagacttggtg
tgggggaaagtaaagtctcacccttggtggcctggccacatcttcaacgaagccttcgcg
tctccctccgttcgccgcatgaggagagtggaccacgtcctcgtcgccttcttcggcgac
agcagttacggatggttcgatcccgccgagctcatccccttcgagcctcatttacccgag
aaggcgcaccagacggccgccaagcactttgtgagagctgtggaggaagctgtggacgag
gcgagtaggaggtcggcgcttgggctgacttgtaaatgcaggaacccgtataactttagg
gcgactagtgttcaggattacttctctgttgatgtcccggattacgaggttcaaggggtt
tactcttgggagcagattaagaaagcgagggatgagttttcgcctgctgaggctttatcg
tttgtgaaagggttggctttagcgcctcgggagtgtgatgatgatgatgatgatgagagt
ttgggttttttgaagaagaaagcggcggtttctgctttccgcaaggcagtgtttgaggag
ttcgatgaaacgtattcacaggcttttgggtccaagtctgtgcgtgcttcggtgacttcg
aatgaaccacataatagaacaccctccagagctcctttgagtggcccgctggtgatagca
gaaactctaggtgtaccgaagagctctaagacccccacaaagattaaggattcgaagaaa
caagacaagtatcttctcaaacgcagagatgaagctggtgataagaatgtttcattgggc
caagtcgaagcaagttcaagcacgggcgttcctgtgctaccgagaagagtgtcaacgctt
caaagtccaataaaagatgagcagcctgggattgtgagcatggattccaactcttcaagt
acagctattcctgggactgttccaaagctctctcttgatgaagaaaaagatgtagccgaa
gaatcagcagagaaaacggaagaaagaactgtagtaaatccagagcatgtgaaatctgaa
gctatggcgcctcttaagcaagagtctggaccagaagctggaagctctctccagcccctg
attgagtctcctcgaggttccacgggatctataatcaagaaactcaaagctgctaaacga
tcttcaagcgaaatgggcactgagaatcctcctccttcagagccagtaaagaaaaagaaa
aagatgaaagagcctaactctaatcttccgagaaagagaaagcttccattatcttctggg
gagcctgtagccaagaaactgtcccagcttggttcagcgcacttacatacctatatggaa
gctgatgtgccgaagctattgggtcatctgcaagatctctgtattgaacctttctctggt
tcatcagttgcttctttcggagctgctaggaagttttttatccgtttccgttcacttaat
taccagaaaagcttgtctgtatcttcatctgatgctactgctactgccttaaacgccaaa
gacacaaaacctggcaagacagtgaacagaaccgaagacccatcaaaagctggcaaaaaa
cgcctctcatctgatcgccaagacgaaatcccattagttaagaagctgaagaaaactaat
cagttgaaaccaatggcttctgagaaactgattaaacgagaagcaaaggagactataaaa
ccaataagagagcagagcggtgcggttcaagcaagaccgttaaaacctcaaaccgggaag
aaaacggctccatcagcaaaggtggtggaacccacaatgcttgtcatgaagtttccacca
ggcacatctcttccttcacctgcactgctaaaggctaggtttggtcggttcgggctgttg
gatcaatcagccatcagggtgttctggaaatcatcgacctgccgtgttgtcttcctgtat
aaagccgacgcacagactgcttttagatatgcaacgggaaacaactctctctttagtaac
gtgaacgtaaggtacttcctccgtgacgttgacgctcctaaagccgagactcaagaacca
gaaaacgcaaaggaagatgatgagccacagagccaagtgccagacccagcatcgccacgt
taccagccaaaactgccaccaccgccaaagagcaacctcaaatcctgcctgaagaaactt
ggagatgacactagcagtaaccgcccaagagtcaagttcatgctggaaggcgaagaaaac
tcgagtaaagcaactaccaacgagccatcgaatagaaacgatggaccttcatcttcatca
tcttttggaatggaatttgttagtaagaagtttcaaaacgttgttcatcatcatcatcaa
cagcttcctcctccttcgacattgccaccaattcttcctctccctccacaatactcaaag
cccattaaaacagtagaccatgttgaaccacctatgccaccaccaccactaccttctaga
agctttcctggtccgagctcagcggttggtgccggagacatctctcaccaaatgctcaac
cttttgtcgaaatgcaacgacgtagtggctaacgtgacaggcttgttgggctatgttcct
taccacccattgtga
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integrated database retrieval system
