Raphanus sativus (radish): 108840425
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Entry
108840425 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: acetyl-CoA carboxylase 1
KO
K11262
acetyl-CoA carboxylase / biotin carboxylase 1 [EC:
6.4.1.2
6.3.4.14
2.1.3.15
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00620
Pyruvate metabolism
rsz00640
Propanoate metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01212
Fatty acid metabolism
Module
rsz_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
108840425
00640 Propanoate metabolism
108840425
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108840425
09110 Biosynthesis of other secondary metabolites
00254 Aflatoxin biosynthesis
108840425
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
108840425
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
108840425
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
108840425
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Gene cluster
GFIT
Motif
Pfam:
ACC_central
Carboxyl_trans
CPSase_L_D2
ACCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
DUF5677
Motif
Other DBs
NCBI-GeneID:
108840425
NCBI-ProteinID:
XP_018468760
UniProt:
A0A6J0M8D6
LinkDB
All DBs
Position
1:complement(21047100..21057292)
Genome browser
AA seq
2302 aa
AA seq
DB search
MEMRALVSCSAAGNGASDRIRLSNVSPLITSARGASGRDFPATVKLGSSSMIRAFKGVSI
YKNKSRRNVLSQRNKQFRPMAYVGRNDLSSHDPTSFCDNDISEPQGTGSINGNDHSAVRV
SQVDEFCKALGGKRPIHSILVATNGMAAVKFIRSVRSWSYQTFGSEKSISLVAMATPEDM
RINAEHIRIADQFMEVPGGTNNNNYANVHLIVEMAQATGVDAVWPGWGHASENPELPDEL
KAKGVIFLGPTAASMEALGDKIGSSLIAQAADVPTLPWSGSHVKIPPGSSLATIPEEVYR
QACVYTTEEAVASCQVVGYPVMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIF
IMKVASQSRHLEVQLLCDQYGNVSALHSRDCSVQRRHQKIIEEGPITVAPRDTVKKLEQA
ARRLAKSVNYVGAATVEFLYSMDTGEYFFLELNPRLQVEHPVTERIADINLPAAQVAVGX
GIPLWQIPEIRRFYGIEHDSWRTTSLVASPFXFDKAESVRPKGHCVAVRVTSEDPDDGFK
PTSGQVQELSFKSNPNVWGYFSVKSGGGIHEFSDSQFGHVFAFGESRAMAIANMVLALKE
IQIRGEVRTNVDYTIDLLHASDYRGNKIHTGWLDSRIAMRVRAERPPWYLSVISGALYKA
SSTGAAVVSDYIAYLDKGQIPPKHISLVHSQVSLNIEGSKYTVDVVRSGSGSYRLRMKNS
EVAAEIHTLRDGGLLMQLDGKSHVIYAEEETSGTRLLIDGKTCLLQNEHDPSKLMAETPC
KLLRYLVSDGSIINADTPYAEVEVMKMCMPLVSPASGVIHFKMSEGQVMLAGELIANLDL
ADPSTVRKAEPFHGGFPRLGLPTEVSAKVHKRCAATLNAARMILAGYEHQVDEVVQDLIS
CLDSPELPFLQWQECFAVLATRLPKDLRIMLESKYKEYECISRNSLTADFPAKLLKGILE
AHVASCHEKERGALERLIEPLMILAKSYEGGRESHACVIVRSLFEEYLSVEELFNDNMLA
DVIERMRQEYKKDRSKIVDLVLSHQGLKSKNKLVLRLMKHFVYANPAVYRDKLVRFLALN
HTNYSELVVKASQLLEQRKLSELRSSILSELEMLAKDGEDMDSPKMKCAINELVSSPLAV
EDALVGLFDHSDRTLQRLAVETYVHRLYQPYVVKGSVRMQWHQYGLIASWEFLDDVMERK
NTGSDDDLETCEEVFVEKRRKKKKGFMVISQSLEFLPNLISAVALTETNHSDYGSPLSGN
IMHIALVGINKDSENEEEQAQERVDKILKEEEVRLRLCSAGVGVVSCVIQRDEERTPIRH
SFHWSMEKQYYAEEPMLRHLEHPLSIYLELDKLKGYENIQYTPSRDRQWHMYTVTDKPVP
VRRMFLRSLVRQPTITDGGLFKCVLGSLMDAMEELELNAHKEDAMKPDHAHMFLCLLREQ
QINDLLPYPRRVGEVEETRMEMILEETVREIHKSAGVRMHRLGVCEWEVRLRLASGAWRA
VVANVTGRTCTVHIYREVEATGRNSLIYQSITKKGPLHGTPINDQYKPLGHLDRQRLAAR
RSNTTYCYDFPLAFETALEQLWESQHQGVKQPFKNTLINVEELVFSGSPEGSLVPVKRPP
GLNDCGMVAWSLEMSTPEYPTGRKLLVVANDVTFKAGSFGPREDAFFLAVTELACAEKLP
LIYLAANSGARLGVAEEVKACFKVGWSDEVSPENGFQYIYLTPEDHARIGSSVIAHEINI
PSGEKRWVIDTIVGKEDGIGVENLTGSGAIAGAYSRAYKETFTLTFVSGRTVGIGAYLAR
LGMRCIQRSDQPIILTGFSTLNKLLGREVYSSHMQLGGPKIMGTNGVVHLTVSDDLEGVS
AILKWLSYVPAYVGGPLPLLAPIDPPERTVEYVPENSCDPRGAIAGVKDNAGKWLGGIFD
KNSFIETLEGWARTVVTGRAKLGGIPVGVVAVETQSVTQIIPADPGQVDLHERVVPQAGQ
VWFPGSAAKTAQALMDFNREGLPLFILANWRGFSGGQRDLFEGILQAGSAIVENLRTYGQ
PVFVYIPKMGELRGGAWVVVDSQINSDYVEMYADETSRGNVLEPEGMIEIKFRKREMLEC
MGRLDQKLISLKAKLQDAKQSEGYELIKQQIKARKKQLLPLYIQIATKFADLHDTSMRMA
AKGVIKSVVEWSGSRSFFYRKLVRRIAESSLVKKVREASGDNLSYKYAMGLIKDWFGKSD
VAKGKEEEAWTDDQVFFTWKENVGNYESELSELRAQKLLKQLAEIGNSSDLQALPQGLAN
ILHKVEPLKRKELVDALRKVLS
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgagagctttggtttcgtgttctgctgctggaaatggagcctctgatcggatt
agactctccaatgtttcaccattgatcacatcagctcgtggtgcaagtggcagagacttt
ccagccacagtgaagctgggaagcagctctatgatcagagccttcaaaggagtttcgatt
tacaaaaacaagagcagaagaaatgttctgtctcaaaggaacaaacagtttcgtcctatg
gcctacgtaggaaggaacgacttgagcagccatgatccgacctccttctgcgataacgat
atatctgaacctcaagggactggctccattaatgggaatgatcatagtgctgtaagagtg
tctcaagtggatgagttctgtaaggctcttggtggaaaaaggccaatccatagcattttg
gttgctaccaatggaatggcagctgtcaagtttatacgcagcgtcagatcatggtcttac
caaacatttggctcggaaaaatccatatcattggtggccatggcgactcctgaagacatg
cggatcaatgcggaacatatcagaatcgctgatcagtttatggaagtccccggtggaact
aacaataacaattatgccaatgttcatcttattgtagagatggctcaagcaacaggtgtg
gatgcagtttggcctggttggggtcatgcatctgaaaaccctgagttacctgatgagtta
aaggccaaaggagtcatatttcttggtcctacagcagcgtcaatggaagcgttaggcgat
aagattggttcgtcgttgattgcacaagctgctgatgtacctactctgccatggagtggt
tcccatgttaaaatacctcctggtagcagcttggcgacgatccccgaggaggtctacagg
caagcttgtgtctacactaccgaagaagcggttgctagttgtcaagttgtcggttatccg
gtaatgatcaaagcatcttggggtggtggcggtaaaggaattaggaaggttcataatgat
gatgaggttagggctctattcaagcaagttcaaggtgaggtcccaggctctccgattttc
ataatgaaggttgcttcgcagagtcggcatttagaggtgcagctgctctgtgaccaatat
ggaaacgtttcagctttgcatagccgtgattgtagcgtccagagacgacaccaaaagatc
atcgaggagggtcccatcactgtggctccccgagataccgtgaagaagctggagcaggca
gctagaaggttggcgaagagtgttaactacgttggagctgctactgttgagtttctctac
agcatggacactggggaatacttcttcttagagcttaaccctaggttacaggtggagcac
cctgtaaccgagcggatcgctgacataaatcttccagctgcccaagttgctgtcggtnat
ggaatccctctctggcaaatccctgagataagacggttctatggtatagaacatgattct
tggaggacaacatctttggtagcctccccttttngatttgataaagctgaatctgtaagg
ccaaagggtcattgtgtcgctgtacgcgtgacaagcgaggatcctgatgacggttttaaa
cccaccagcggtcaagtgcaggagcttagttttaagagcaacccaaatgtgtggggttac
ttctctgtcaagtctggtggaggcatccacgagttctcagattctcagtttggacatgtt
tttgcatttggggaatccagagctatggcaatagcaaatatggttcttgcgctgaaagaa
attcaaattcgtggagaagttaggactaacgttgactacacgattgaccttctacatgct
tctgattaccggggaaacaaaattcacactggttggttggacagtagaattgctatgcgg
gtccgagcagagaggcctccgtggtacctctctgtcatcagcggggctctctataaagca
tcatcgactggtgctgccgtggtctctgactacattgcttatcttgacaaggggcaaatt
cccccaaagcatatatctctagtgcattctcaagtgtctctgaatattgaaggaagtaaa
tatacggttgatgtggtccggagtggatcaggaagctacaggctaagaatgaagaactca
gaagtggcagcagaaatacacacactacgtgatggaggtttgttgatgcagctggatggt
aaaagccatgttatatatgcagaggaagaaacctcaggaacccgtcttctgattgacgga
aaaacttgtttacttcagaatgaacacgacccttcaaaattaatggctgagacaccgtgc
aagctacttaggtatctggtttcagatggtagcatcattaatgcggatacaccctatgca
gaggttgaggtcatgaagatgtgcatgccgcttgtttcacctgcgtcaggagttatccat
ttcaaaatgtctgaaggacaagtcatgctggctggtgaacttatagccaatcttgatctt
gctgatccttcgactgtaagaaaggccgaacccttccatggaggtttcccaagattaggg
cttccaacggaagtttctgctaaagttcacaagagatgtgctgcaactttaaatgctgct
cgcatgattcttgccggctatgagcatcaagtagacgaggttgttcaagacttgatttct
tgccttgatagccctgaactcccattccttcagtggcaagaatgctttgcagttctggca
acacggttaccaaaagatctcagaatcatgctagaatcaaagtataaggaatatgagtgt
atctccaggaactccttgaccgcagattttcctgccaaacttttaaaaggcattctggag
gctcatgtagcatcttgtcatgagaaagagagaggtgcccttgaaaggctcattgaacca
ttgatgatccttgcaaagtcttacgaaggtggtagagaaagtcatgcctgtgttattgtt
cgttccctctttgaggaatatctgtcagtagaagaactattcaatgataacatgctggct
gatgttatagaacgtatgcgtcaggaatacaagaaagatcggtccaagattgtggattta
gtgttatcacaccagggcctaaaaagcaaaaacaagctcgttctccgactcatgaagcat
tttgtttatgctaatcctgctgtgtacagagataaacttgtccgattcttggcacttaac
catactaactactctgagttggtggtcaaggcgagtcaattactcgaacagagaaaacta
agtgaacttcgttctagcatcctgtcggagttagaaatgttggcaaaggatggggaagat
atggattctcccaagatgaagtgtgccattaatgaactcgtgagctcacctttagctgtt
gaagatgctctcgtgggactatttgaccacagcgaccgcacacttcaaagactggctgtt
gagacttatgttcacagattgtaccagccttacgtcgttaaaggaagcgtgaggatgcag
tggcaccaatatggtcttattgcttcctgggagttcctagacgatgttatggaaagaaaa
aacactggctcggatgatgacctagagacatgtgaagaagtttttgttgagaagcgtaga
aagaaaaaaaaggggtttatggttataagccaatcgctggagtttctgccgaatttaata
agtgcagtagcactgacagaaacaaaccacagcgactatggatctcctttatctggcaat
ataatgcacattgctcttgtgggcatcaacaaggacagtgaaaatgaggaggaacaagct
caagaaagagtggataaaattctcaaagaggaagaagtgaggttgagactgtgttctgca
ggtgtcggtgtggtcagctgtgtaatccagcgagatgaagaacgaacacctattagacat
tcgttccattggtcgatggagaaacaatattatgcagaagagccgatgctgcgccatctt
gaacatcctctctccatataccttgaattggataagctgaaaggatatgaaaatatacaa
tataccccttcacgagatcgtcagtggcatatgtatactgtcacagacaagccggtgcca
gtcaggaggatgttcctgagatctcttgttcgacagcctacaataaccgatggtggcttg
ttcaaatgcgttcttggatctttgatggatgcaatggaggaacttgaactgaatgctcat
aaggaggatgctatgaaaccagaccacgcacatatgtttctttgcctacttcgtgagcag
cagattaatgatcttttgccttaccccaggagagttggggaggttgaagaaactagaatg
gagatgatcttagaagaaacggtacgagagatacacaagtcagctggagtgagaatgcat
aggttgggtgtgtgcgagtgggaagtgcggctgcggttggcaagtggcgcttggagggct
gtggttgcaaacgtgacaggccgtacatgcactgtccatatataccgagaagttgaagct
actggtagaaatagtttaatttatcaatcaataaccaagaagggacctttgcatggaacc
ccgatcaatgatcaatataaaccactgggacatcttgacaggcaacgattagccgcaagg
aggagtaacactacttattgctatgatttcccgttggcatttgagacagccttggaacag
ttgtgggaatcacaacaccagggagttaagcaaccgtttaagaacactctgatcaatgtt
gaagagcttgtattctctggaagtccagaaggttctcttgttccggttaaaagaccaccg
ggtctcaacgactgtggaatggtggcatggagcctagagatgtcgactcccgagtatcca
acgggacggaaacttctcgtagtcgccaatgatgtcaccttcaaagctggttcgtttggt
cctagagaggacgcatttttccttgctgtgactgaactcgcttgcgccgaaaagcttccc
ttgatttacttagcagcaaattctggtgcacgtctaggtgtagcggaagaagtcaaagcc
tgctttaaagttggatggtcggatgaagtttcccctgagaatggttttcagtatatatac
ctaacccctgaagatcacgcaaggattggatcatctgtcatcgcgcacgaaataaatatc
cccagtggggaaaagagatgggttatcgatacaatcgttggtaaagaagatggtatcggc
gtagagaacttaacgggaagcggggcgatagcgggtgcttactcaagagcctacaaggag
acttttactttaacctttgttagtggaagaacggttggtattggtgcttaccttgcccgc
cttggtatgcggtgcatacagagatcagaccagccgatcatcttgactggcttttcgacg
ctgaacaagttacttgggcgtgaggtttacagctctcacatgcaacttggtggccccaaa
atcatgggcacgaacggtgttgttcatcttacggtctcggatgatcttgaaggcgtgtcg
gcgattctaaaatggctgagctacgttcctgcttacgttggtggtcctcttcctcttctt
gctcctatagatccaccggagagaaccgtggagtatgtaccagagaactcttgcgacccg
cgaggagctatagctggtgtcaaagacaatgccggtaaatggcttggcggtatctttgat
aaaaacagctttattgagacgctcgaaggctgggcgaggacggtagtgactggtagagct
aagctcggggggatacctgttggagttgtagcggtcgagacacagagcgtaacgcagatt
attccagcggatcctggacaggtcgacttgcatgaaagagttgttccgcaagcagggcaa
gtctggttccctggctcggcggccaagacggctcaagccctcatggatttcaaccgggaa
gggcttcctttgtttatcctagcgaactggcgagggttttcgggtgggcagagagatctt
ttcgaagggatactccaggctggttctgctatagtcgagaatctgagaacgtatgggcag
ccggtgtttgtgtacatccctaagatgggagagctgcgaggtggagcgtgggtggttgtt
gatagccagataaattcggattacgtcgagatgtatgctgacgagacgtctcgtgggaat
gtgcttgagccggaagggatgattgagataaagtttagaaagagagagatgttggagtgc
atgggaaggcttgaccagaagctgattagtctcaaagcaaaacttcaagatgcaaaacaa
agcgagggttatgaacttatcaagcaacagattaaagcgaggaagaagcagcttttacca
ctttacatccagatcgccaccaaatttgcggatcttcacgacacttccatgaggatggcg
gcaaaaggagtgatcaaaagtgtcgttgaatggagcgggtcgcgatctttcttctataga
aagctcgttcggagaattgccgagagctcactggtgaaaaaggtgagagaggcttctggg
gacaacttgtcgtacaaatatgcaatgggtttgattaaggattggtttggaaaatccgat
gttgcaaaggggaaagaagaagaagcttggacagacgaccaagtgttctttacgtggaag
gagaatgttggtaactacgaatccgagctcagcgagttgagagcacagaaactgctgaag
caacttgcggagattgggaattcatctgatctgcaggctctgccccagggacttgctaat
attctacacaaggtggaacctttgaaaagaaaagagctagtggatgcgctaagaaaggtg
ttgagttga
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integrated database retrieval system
