Raphanus sativus (radish): 108842359
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Entry
108842359 CDS
T06014
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00130
Ubiquinone and other terpenoid-quinone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01240
Biosynthesis of cofactors
Module
rsz_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
108842359
Enzymes [BR:
rsz01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
108842359
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
108842359
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
108842359
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
108842359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_1
TPP_enzyme_M_2
TPP_enzyme_N
Abhydrolase_6
TPP_enzyme_C
Hydrolase_4
BAAT_C
Ndr
Abhydrolase_2
Thioesterase
Abhydrolase_3
DLH
MenC_N
Esterase
Abhydrolase_11
Mbeg1-like
Lipase
LIDHydrolase
Chlorophyllase
Motif
Other DBs
NCBI-GeneID:
108842359
NCBI-ProteinID:
XP_018470743
UniProt:
A0A6J0MFN8
LinkDB
All DBs
Position
2:complement(6060446..6070189)
Genome browser
AA seq
1713 aa
AA seq
DB search
MPSPCHSFLLSNPPFLPSLIPPRYTSRYSFARRTQRFSSSFSKPLPLSRNVIEVAQGSQF
DGLILSRDDVDEDDELTVQACVTRTLPPALTLEIGLERLVEAVEELKTNPPKSSSGVLRF
QVAVPPRAKALFWFCTQPVSSGVFPVFFLSKDTLDPSCKSLYVKEPQGVFGIGDALSFLH
RSKGHSTIKTFLSDESAMVTAYGFPDIDFTGNSSVYSKDGSSYFFVPQIELDERGEVSIL
AVTLAWNDSLSYSFEQAISSYEKSIFQVSCHVCPSLEDHWFKHLKSSLAKLAVNEIHPIE
MEHMGFVTFSGRDQGDAKELKNIQSSRQFHCKLSSDVVFSNNMLNQEAKVSYSLKDQANI
NAVWASAIIEECTRLGLTYFCVAPGSRSSHLAIAAANHPLTTCLACFDERSLAFHAIGYA
KGSLKPAVIITSSGTAVSNLLPAVVEASEDFLPMLLLTADRPPELQGVGANQAINQINHF
GSFVRFFFNLPPPTDDIPVRMVLTTVDSALHWATGSPCGPVHLNCAFRDPLDGSPTNWSL
NCLNGLDMWMSNAEPFTKYFQVQSLKSSGETTGQITEVLQVIKEAKKGLLLIGAIHTEDE
IWASLLLAKELMWPVVADVLSGVRLRKLSKPFLEKWTPVFVDHLDHALLSDSVRNLIEFD
VVIQVGSRITSKRVSQVLEKCFPFAYILVDKHPCRHDPSHLVTHRVQSNIVQFADCVLKS
RFPWRRSKLHGHLHALDGAIAREMSFRLSAECSLTEPYVAHMLSKALTSKSALFIGNSMP
IRDVDMYGCSSGNYSHVVDLMLSAELPCQWIQVTGNRGASGIDGLLSSATGFAVGCKKRV
VCVVGDISFLHDTNGLAILKQRIARKPMTILVINNRGGGIFRLLPIAKRTEPSVLNQYFY
TSHDISIENLCLAHGVKYVHVGTKRELEETLLVPGVEEMDCIVEIESSIDANAMVHSTLE
SFARQAANNSLAIISASSVLHPMMDNARLFQVSGIQYSRYRVGLCDRPTIYSGESSQFHR
EGFILSITLEDGSIGCGEVAPLDSSTENLMDVEGQLQLILHLMKGAKISHMLPLLNGSFS
SWIWSELGITASSIFPSVRCGLEMALLNAMAVRHDSSLLGILHCQKAENGYAQPHSVPIC
ALLDSEGTPSEVAYVARKLVEEGFSAIKLKVARRVNSVQDALVLQEVRRVVGDQIELRVD
ANCRWTFEEAITFGLLVKKCNLQYIEEPVQNKDDLIRFCEESGLPVALDERLDDFKECPL
RILAKYTHPGVVAVVIKPSVVGGFENAALIARWAQQHGKMAVISAAYESGLGLSAYILFA
SYLEMENVKTFRERKLGMAPLVAHGLGTYKWLNEDVLVTSLGISRSPYSGFVEGSVADAG
KNLKDVKINNDVIVRTSKGALVRRYEVRVDVDGFSHFIKIHEVGPNIEGSVVLFLHGFLG
TGEEWIPIMKGISGSARCISVDIPGHGSSTVQSHASETQKTPTFSMEIIAEAMYKLIEQI
TPGKVTIVGYSMGARIALYMALRFSNKIEGAVVVSGSPGVKDPVARKVRSATDDSKARMM
VDHGLEIFLENWYNGGLWKSLRTHPHFRKIVASRLIHDDVLSVAKLLSDLSTGRQPSLWE
ELADCNTNVSLVFGEKDVKFKNIATRMYVEMSEGKKSENYIIETVEIPEAGHAVHLESPL
LLILALRKFLTRVRKNSAETELSQKLLLALKET
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgccatctccatgccactcctttctcctctccaatcctccctttctaccttctctgatt
cctcctcgctacacttccagatactccttcgcacgacgaacacaacgcttctcctcctcc
ttctccaagcctcttccgctttctcgaaacgtcatcgaggtcgctcaaggatctcaattc
gatggattgattctgagtagagacgatgtggatgaggacgatgagttaacggtacaagcg
tgtgtgactcgtacgttgcctcctgctttgactcttgagattggactcgagagactcgtg
gaagctgtggaagaactcaagactaatcctccaaagtcttctagtggcgtcttgcgattt
caagtggctgtgcctccgagagcaaaggctttgttctggttctgcactcaacctgtgtct
tccggtgtatttcctgtgtttttcctctccaaggatactctggacccttcttgtaagtcg
ctctatgtaaaggaacctcaaggggtttttggtattggggacgcactctctttccttcat
cgctccaagggacatagcaccatcaaaacattcctctcagatgaatcagctatggtgacg
gcctatggttttccagatattgatttcactggaaactctagtgtatatagcaaggatggc
tcttcttacttcttcgttcctcagatcgagttagatgaacgcggggaggtctccatatta
gcagttacactggcatggaatgattctctatcctacagttttgagcaagcaattagttca
tatgagaaatcaatttttcaggtttcttgtcatgtctgccccagtttagaggatcattgg
ttcaaacatctaaaaagttctcttgcaaagttggctgtaaatgagattcatccaattgag
atggagcatatggggtttgtaacattttctgggagagatcagggtgacgccaaggaactg
aaaaatattcaatcatcgcgccagttccattgcaagctttcatctgacgttgttttctca
aacaacatgctgaatcaggaggctaaagtgagctactccttgaaagatcaggctaatatc
aatgctgtatgggcatcagctataattgaagaatgcactcgtcttggtttgacgtacttt
tgtgtagctcctggatcaagatcctctcatcttgcaattgctgctgccaaccaccccctt
acaacgtgtcttgcatgctttgacgaacgatctcttgcatttcacgctattgggtatgct
aaaggatcccttaaaccggcagttattataacatcatcaggaaccgccgtttcaaatctt
cttccagcggtggttgaggccagtgaggatttcttacctatgctactacttactgcagat
cgtcctcctgaacttcagggagttggtgcaaatcaagctataaatcaaataaaccatttt
ggttcgtttgtcagattcttcttcaatcttcctcctccaactgatgatataccagtccgg
atggtccttactactgtagactctgctttacattgggcaacaggttctccttgtggacca
gtacatctgaattgtgcttttagagacccacttgacggtagtccaacaaattggtcactc
aactgcttaaatggattagacatgtggatgtctaatgctgaaccattcacaaaatatttt
caagtacaaagcctcaagagcagtggtgaaacaactggccaaattactgaggttttacaa
gtaatcaaagaggctaagaagggtcttctcctgatcggtgcaatccatacggaggatgaa
atttgggcttctcttctgttggctaaagaactgatgtggcctgttgttgcagatgtgttg
tctggtgtccggctgcgcaagctgtctaagccttttctcgagaagtggacccctgttttt
gttgatcatcttgatcatgccctgctttcagattctgttaggaatttgattgagtttgat
gttgttatccaggttggaagtcggataacaagcaaaagagtttctcaggtgctagagaaa
tgctttccatttgcatacattttggttgataagcatccatgccgacatgacccatcacac
ttggtcactcacagggtccaaagcaatatagttcagtttgctgattgcgtgcttaaatct
cgatttccatggaggagaagcaaattgcatggccatttacatgcattggatggcgctatt
gcccgagaaatgtcatttcgattatctgctgagtgctccctgaccgaaccttatgttgca
catatgctttccaaagcactgacatctaaatctgctcttttcatcggtaatagtatgcca
ataagggatgtggatatgtatggatgtagttcgggaaattattcgcacgtggtagacttg
atgttaagtgcagaattaccatgtcaatggatacaagtaactggaaatagaggagctagt
ggcattgatggcttgctcagctccgccactggctttgctgtagggtgcaagaagagagtt
gtctgtgtggtgggagacatctctttccttcatgatacaaatggattggcgattctgaaa
cagaggattgcgaggaaaccaatgacaattctcgtgataaacaatcgtggaggtggaatc
ttccgacttcttcctatagcaaagagaacagagcctagcgtgttgaatcaatatttctat
acatcacatgacatttccattgaaaacttgtgtttggcacatggtgtgaagtatgtacac
gttgggacaaaaagggaacttgaggaaactctattggtacccggcgtggaagagatggat
tgcattgtggagattgaaagctctattgatgctaacgcaatggttcatagtactttggag
agttttgcacgccaagctgcaaataattccttggccattatctcggccagttcagttctt
catccaatgatggacaatgcacgtcttttccaagtctctggaatacaatattcgcggtac
agagtcggactgtgtgacagacctaccatatattctggtgaatcctctcaattccatcga
gaaggtttcatactttccataactttggaggatggaagcattggctgcggagaggttgca
cctttggacagtagtacggagaacttaatggatgtggaggggcagctacagttgattctc
caccttatgaaaggagctaaaatcagtcacatgcttcctttgttaaatggctcgttttct
tcctggatttggagtgaacttggaatcactgcatcatcaatttttccaagtgtcagatgt
ggtctggaaatggctcttctgaatgcaatggcagtaagacatgattctagtttgttgggg
atacttcattgtcagaaagcagaaaatggttatgctcagccacactctgttccaatatgt
gcccttcttgattctgaaggtactccatcagaggtcgcatacgttgctagaaaacttgtt
gaagaagggttcagtgctattaaacttaaagttgctcgtcgggtgaactccgttcaagat
gccttagttctgcaagaagtaaggagagtcgttggagatcaaattgaactccgtgtagat
gctaattgtcgctggacttttgaagaagctataacgtttggtttgttggtgaaaaaatgc
aacctacaatatattgaggaacctgtccagaacaaagatgatcttataaggttttgtgaa
gaaagtggattaccagtggcacttgatgagagacttgatgatttcaaggaatgtcctctg
cgcatacttgccaaatatacccatcctggagtagttgctgttgttattaaaccaagtgtt
gtgggagggtttgagaatgcagcactgattgctcgctgggcacagcagcatggaaagatg
gctgttataagtgccgcatacgaaagtggcctaggtttatcagcatatattttgtttgca
tcgtatctggagatggaaaacgtcaaaacattcagagagagaaagctagggatggcccct
cttgtagcccatggtcttggtacctacaaatggcttaatgaagacgtattggtgactagt
ctagggatatctcgtagtccgtatagtggatttgtcgaaggatctgttgctgacgctggc
aaaaatctaaaggatgttaagataaacaacgatgttattgttagaaccagtaaaggagct
cttgtgcggaggtatgaagtgagggtggatgtagatggtttctctcattttataaaaatc
cacgaggttggaccgaatatagaaggaagtgtagtgttgtttcttcatgggtttcttgga
actggtgaagaatggatccccatcatgaagggtatctcaggatctgcaagatgcatttca
gttgatattcctggtcatggaagctcaacggtacaaagtcatgctagtgagacccagaag
accccaactttctcaatggagattatagcggaagcaatgtataagctgattgagcaaatt
actcctggaaaagtgaccatagttggatattccatgggagcaagaatagcactgtacatg
gctttaaggtttagcaacaagatcgaaggagctgttgtggtatcaggcagccctggggtc
aaggatccagtggcaaggaaagttcgaagtgcaacagatgattctaaagcacgaatgatg
gttgaccatggactagaaatctttctggagaactggtacaatggaggcttgtggaaaagt
ttgagaactcatccccatttcagaaagattgttgcaagccgcttgatacatgacgatgtc
cttagtgttgcaaagctcctctcagatctgagcactgggagacagccgtcattgtgggaa
gagttggcggattgtaatacaaatgtgtcgcttgttttcggagagaaagatgtaaaattc
aagaatattgctactaggatgtacgttgagatgagtgaaggcaagaagagcgaaaactat
atcattgagacggttgaaatcccagaggctggtcacgctgttcatctggagagccctctg
ctcttgatcctcgctcttagaaagttcttaacaagagtgcgcaaaaactctgcagagacg
gagctttctcagaagctcttgttagcacttaaagaaacataa
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integrated database retrieval system
