Raphanus sativus (radish): 108842626
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Entry
108842626 CDS
T06014
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
rsz03013
Nucleocytoplasmic transport
rsz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108842626
03008 Ribosome biogenesis in eukaryotes
108842626
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108842626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108842626
03009 Ribosome biogenesis [BR:
rsz03009
]
108842626
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108842626
03036 Chromosome and associated proteins [BR:
rsz03036
]
108842626
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108842626
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108842626
Pre-60S particles
108842626
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108842626
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108842626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Gpr1_Fun34_YaaH
DUF3385
Mesothelin
Motif
Other DBs
NCBI-GeneID:
108842626
NCBI-ProteinID:
XP_018471108
UniProt:
A0A6J0MGR8
LinkDB
All DBs
Position
2:28764238..28772098
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVGVLDATVAAFFVTGSKEERAAADQILRDLQANPDMWLQVVHILQN
TKSMDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSGNEASFRSERLYVNK
LNVILVQIVKHDWPAKWTSFIPDLVAAAKTSETICENCMIILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASQRQDLIRSTLSALHAYLSWIPLGYIFESPLLET
LIKFFPVPAYRNLTLQCLTEVAALNFGDFYNIQYVKMYTVFIGQLQAILPPSTNIPEAYS
NGSDEEQAFIQNLALFFTSFFKFHIRVLESAPEIVSLLLSGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFDAHHNSDNPAASANLMGLQMPFISGMVDGLGSQVMLRRQLYSNPMSKL
RGLMINRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQM
LRKLNKQLSGEEWAWNNLNTLCWAIGSISGSMAEDQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGETEPFVSELLSGLATTVQDLEPHQIHSFYESVGNMIQAESDPQKRDEYLQR
LMALPNQKWAEIIGQARQSVEFLKDPDVIRTVLNILQTNTSAATSLGTYFLSQISLIFLD
MLNVYRMYSELVSTSITSGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQF
VPPMMESVLCDYARNVPDARESEVLSLFATIINKYKATMLDDVPNIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATFCFPALIKLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQQSAFCNQFFRSYFIQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGA
LTEPLWDSATVPYPYPNNVAFVREYTIKLLSTSFPNMTAAEVTQFVNGLYESRNDPSEFK
KNIRDFLVQSKEFSAQDNKDLYAEEAAAQREQERQRMLSIPGLVAPNEIQDEMVDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagctaagagacttgagccagccgattgacgtcggcgtcctcgatgcc
accgtcgcagccttcttcgtcaccggatctaaggaagagagagctgctgcggaccagatt
ctgcgggacttgcaagctaatcccgatatgtggcttcaggttgttcacattctacagaac
acaaagagcatggataccaagttctttgcccttcaggttctagaaggtgttataaagtac
agatggaatgcactgcctgttgaacaacgggatggaatgaaaaattacatttcagaggtc
attgtacagctctcgggtaatgaagcgtctttcagatcggaaaggctctatgtcaacaaa
ctaaatgttatattggttcagatagtgaagcatgattggccggcaaagtggacaagcttc
attcctgatctagttgccgctgctaaaactagcgaaaccatctgcgaaaattgcatgatc
attttaaaactcctaagcgaagaggtttttgatttctcaagaggagaaatgactcagcag
aagattaaagagctgaaacaatctctaaacagcgagtttaaactcattcacgagctatgc
ctatatgtcctctcagcatctcaaagacaggatcttatacgttcaacactgtctgcgttg
catgcttatctatcctggattccgttgggctatatttttgagtctcctttgctcgagacc
ctcattaaattctttcctgtgccagcatataggaatctcacacttcaatgtctaactgag
gttgcagctctcaatttcggagacttctacaacatccaatatgtcaagatgtacactgta
ttcatagggcagctgcaggcaattctcccaccgagtacaaatatcccagaggcatattca
aatggaagtgatgaagaacaagcatttatccagaacctggcactatttttcacttcgttt
ttcaagtttcacatacgagttctggaatcagctccagaaattgtctccttattactttcc
ggtctcgaatatctcatcaatatatcatacgttgatgacactgaagtttttaaggtttgt
ttagactactggaactcattggttctggagctgtttgatgcacatcataattcggataac
cctgcagcaagtgcaaatctgatgggattgcagatgcctttcatttctggtatggttgat
ggccttggttcgcaagtcatgctgcggcgtcaactttattcgaaccctatgtccaaacta
agagggttaatgattaaccgcatggcgaagcctgaagaagtgcttattgttgaagatgaa
aatgggaacatcgtccgtgaaactatgaaggacaatgatgttcttgttcagtataagata
atgcgggagacattaatctacctctcacaccttgatcatgatgacactgagaagcagatg
ttgaggaagctaaacaaacaattaagcggggaggaatgggcatggaacaatttgaatacg
ttgtgctgggctattgggtctatttctggatccatggcagaagatcaggaaaatagattt
ttggtgatggtcattcgtgatttgttgaatttatgtgagatcactaagggcaaagacaat
aaagctgtcattgctagcaacattatgtatgtcgttggccagtatccaaggttcttaagg
gcccattggaagtttttgaaaacagttgtgaataagctgtttgaattcatgcatgagaca
catcctggtgttcaggacatggcctgtgatacatttttgaaaatagttcagaagtgcaag
cgtaaatttgtcattgtccaggttggagagactgaaccatttgtatctgagctcctgtct
ggccttgcaacaactgttcaagatcttgagcctcatcaaattcactcattttatgaatct
gttggtaatatgatccaagcagaatcagatcctcagaagagagatgaatatctacagagg
ttgatggcactcccaaaccagaaatgggcagaaatcataggacaggcacgccagagtgta
gaatttctcaaggatccagatgtgatacgtacagtgcttaatatcctgcagaccaacact
agtgctgctacttcactaggaacgtacttcttatcccaaatttccttgatattcttggat
atgctgaatgtctacagaatgtacagtgagcttgtgtcaaccagcattactagtgggggg
ccatatgcttccaagacatcttttgtaaaactcttaagatctgtcaagagggaaaccctt
aagctgattgaaacctttttagacaaagctgaagaccaaccacacatagggaaacagttt
gtgcctccaatgatggaatctgtactttgtgactatgcgaggaatgtgcctgatgctagg
gaatcagaagttctttcactttttgcaacgattataaacaagtacaaggcgacaatgtta
gatgacgtgccaaacatatttgaagctgttttccagtgtacattggagatgataactaag
aacttcgaagattatccggaacaccgcctcaagtttttctcattactccgtgctattgct
acattttgcttccctgccttaataaagttgtcaagtcagcaactgaagctagtgatggat
tcaatcatctgggcatttagacatacggagagaaatattgctgaaactgggcttaatctc
ttacttgagatgctgaagaactttcagcaatctgcgttttgtaatcaattcttccggtca
tacttcatacaaatcgagcaagaaatatttgctgttttgactgataccttccataagcct
ggcttcaagctgcatgtgttggtgctgcagcatctgttttgcctggttgagagcggtgct
ttgacggaacctttgtgggattctgcaaccgtaccttacccgtatccgaacaacgttgcc
tttgttcgtgaatacacaatcaagctgttgagcacttcattccccaacatgactgcagca
gaggtcacacagtttgtgaatggactttacgagtcaagaaatgacccgtctgaatttaag
aaaaacatccgtgacttccttgtacagtctaaggaattctccgctcaggataacaaagac
ctctacgccgaggaagcagctgcgcagagagagcaagagcgtcaaagaatgctttcgatt
cctggtcttgttgctcctaatgagattcaagacgagatggtggactcctaa
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