Raphanus sativus (radish): 108843473
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Entry
108843473 CDS
T06014
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00270
Cysteine and methionine metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108843473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108843473
03032 DNA replication proteins [BR:
rsz03032
]
108843473
03036 Chromosome and associated proteins [BR:
rsz03036
]
108843473
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rsz02048
]
108843473
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108843473
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108843473
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108843473
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108843473
Prokaryotic defense system [BR:
rsz02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
108843473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
108843473
NCBI-ProteinID:
XP_018472179
UniProt:
A0A6J0MJ81
LinkDB
All DBs
Position
2:31126476..31132742
Genome browser
AA seq
1182 aa
AA seq
DB search
MLSPAKCESEEEPTAELDLLHSSSPRSGLPERLSLVPTEAAAAAAAAQSSTLEEPMKLSE
AEMSTSRRSTRLNCDSPGARKSPRFFTPVDGKIDNVSSVPITRKTVSSNRKISSAPVKKG
SLDSVGLSFEDIAAIGKSLEMGIVSECQDSNAQGRSQVPPKRKLDDCDAALLSSSIELSS
QINKRTRRSSRFTTGVENLGDKPVPSITSSRLSGTFEIRLGLCDAKQVRGTEKLVQVREN
GNCYEGHGLVSSKQELLNSPTGCVKTTVNGSRVKSLGKRRSSDPNASGVHTSSLKISQNG
TSNGLVTASDADNGVSGEMHADATVIYLSDDDEEPQHVQDSVEFLYTTSSDGDVLMQDAS
GSTLSSGENGRQAPLDQNTPIKSTKGKGARVTRIAVREKHEHGSCFFIGEPIPCEEAKER
WRWRYDLKERKSKRKGKQAEDDEDMIVSNVECHYSQAKVDNKTFSLGDFAYVKGEGKERL
IGKIIEFFKTTDGESYFRVQWLYRATDTVMLKEAADHETRRLFYSTVMNDNPIDCLISKV
TVLQVSPRAGLKPNSIKSDFYFDMEYCVEFSTFRTLRNQTSENKLECCAADVTPTESTES
ILENKSNSKEELLVLDLYSGCGGMSTGLNLGAKVSGVDVVTKWAIDQELAACESLKLNHP
HTQVRNDSAGDFLLLLKEWDKLCKRYVCNDGDGQTTVTLNPENSTKETSESSSSTDDDSE
PDEYEVEKLVDICYGDPDKSGESGLKFKVHWKGYSSNEDTWEPAEELSNCEDAMREFVTR
GFKNKILPLPGGVGVICGGPPCQGISGYNRHRDVDTPLTDERNQQIGVFMDIVEYLKPKF
VLMENVVDLLRLDKGSLGRLALSRLVDMRYQARLGIMTAGCYGLSQFRSRVFMWGADPDM
KLPPFPLPTHDVIVRYGLPIEFEWNVVAYSEGQPRNVETALVLKDAISDLPHVSYNETRE
KMSYESLPETDFQRYIRSTKHEMTGSEIDRCTKRTMPLYDHRPSRLSEDDYNRVCQIPKK
KGANFRDLPGIIVRNNTVYRDPSMEPVLLPSGKHLVPEYVFTFQKGKSKRPFGRLWWDET
VPTVLTVPSCTNQVFLHPEQDRVLTIREAARLQGFPDYFQFCGTVKQRYRQIGNAVAVSV
SRALGYSLGMAFRGLAGDENMIELPQKFSHSSYLQLQETSPH
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgttatccccggctaaatgtgagtcagaggaggagcccactgctgaattggatctcctc
cactcttcttcacctagatccgggttacccgaacgtctctccctcgtccccaccgaagct
gctgctgctgctgctgctgctcagtcttctactctagaagaacccatgaagctctccgag
gcagagatgagcacgagcaggagatccacgaggctcaattgtgattcgcctggtgctcgg
aagtcgccgagattttttacgccggtggatggaaagatcgataatgtgtcctctgttccg
atcacaagaaagactgtgtctagtaatagaaagattagtagtgctcccgttaagaaggga
agcttagactctgtcggattgtcattcgaagacatagctgcgattggcaagagcttggag
atgggtatcgtttccgagtgccaggatagcaacgctcaaggtagatcgcaagttccgcct
aagaggaaacttgacgactgtgatgctgcattattatcttcaagtatcgagctttctagc
cagatcaacaaacggacgaggagatcttcgaggttcaccacgggggtggagaatctaggc
gacaagcctgtcccatccattacatcttcaaggctatctggaacttttgaaattcgcctg
ggattatgtgatgccaaacaggtgagaggaactgagaagctagtgcaagttagggagaat
ggtaactgctatgaaggtcatggccttgtttcatctaagcaagagctgttaaattctccc
acaggttgcgtcaagacaactgtaaatggtagtagggtcaagtcgttaggaaaacgcaga
tcttctgacccaaatgctagtggtgttcacactagctctttgaaaattagtcaaaatggt
acgagtaatggattagtgactgctagtgatgctgataacggagtaagtggggagatgcat
gcagatgctactgtgatctatctttctgacgacgatgaagagccgcagcacgtacaagat
tcggttgaatttttgtatacgacaagctctgatggagatgttttgatgcaagatgcaagt
ggatctaccctctcctcaggggaaaacgggagacaagcaccactggatcaaaatactcca
atcaaatcaactaagggaaagggtgcgcgagtgacccgtattgctgtccgtgaaaagcat
gaacatggttcctgctttttcattggagagccaattccttgcgaggaggctaaagaaaga
tggcgctggagatatgacctcaaggaacgcaagtccaagagaaaaggcaaacaggcagaa
gatgacgaagacatgattgtttcaaatgtggaatgccattattcgcaagcaaaagtcgac
aataaaacgtttagccttggagactttgcctacgtaaagggtgaaggaaaagagagactt
atcggcaagataatagagttttttaagacaacagatggcgaaagctacttccgagttcag
tggttgtacagagcaacggatacagtaatgctgaaggaggctgctgatcacgagacaagg
cgtctcttctattctactgtaatgaatgataatccaatagattgtcttatttctaaagtt
actgttttacaagtatcacctagggcaggattaaagcccaattctattaaatctgacttt
tattttgatatggaatattgcgtggagttttcgacatttcgaaccttgagaaatcaaact
tccgagaacaagcttgaatgttgcgccgccgatgtgacacctacagaatccactgaatct
attttggaaaataaaagtaatagcaaagaagagcttctggtgcttgatctttacagtggt
tgtggtggaatgtccactgggttgaatcttggagccaaggtttctggagttgacgttgtg
acgaaatgggctattgaccaggaattggctgcttgtgagagcttgaaattgaaccatcca
catacgcaggttaggaatgattctgctggagatttcctcctacttttgaaggagtgggat
aaattatgcaagcgctatgtgtgtaacgatggtgatggtcagacgactgttacattaaac
cccgaaaattcaacaaaagaaaccagtgaaagtagctcttctactgacgatgattcagaa
cctgatgagtacgaagttgaaaagctggttgatatatgttatggtgatcctgacaagtca
ggagaatctggcctgaagtttaaggtgcactggaaaggatatagcagcaacgaagatact
tgggagccagcagaggaactgagcaattgtgaagatgccatgcgcgagtttgttacaaga
ggattcaagaacaagatcttaccacttcccggcggtgttggcgtgatatgtggtggacct
ccatgtcaaggaattagtggctataaccgccatagggatgttgatactccgttgactgat
gaaaggaatcagcaaattggagttttcatggacatagtggagtatctgaaacccaaattc
gtgttgatggaaaacgttgttgatcttctgcgtttggacaaaggttctcttgggagactc
gctttgagccgtcttgtggacatgagataccaagcgaggctaggtatcatgacagctggt
tgctatggtctttcccaatttcgttcccgagttttcatgtggggtgctgatccagacatg
aaactacctccgtttccgcttccaacccatgatgttattgtcagatatgggcttcctatt
gagttcgagtggaatgtagttgcttacagtgaaggccagccaagaaacgtcgaaacagct
cttgttctaaaagatgcgatatcagatcttcctcatgtgtcatacaacgaaacccgggaa
aaaatgtcttacgaaagtctaccagagacggatttccagagatacattagatcaaccaaa
cacgaaatgactggctctgagattgatagatgtacaaaaaggacgatgccactgtatgat
cacaggccatcccgtttgtctgaagatgattataaccgagtttgtcaaatcccaaagaag
aagggagctaatttcagggatcttccagggataatcgtcagaaacaatacagtctaccgt
gatccatcaatggaacctgttcttctgccatcaggaaagcatttggtaccagaatacgtc
tttacttttcagaaagggaaatctaaaagaccgtttgggcgtctttggtgggacgagaca
gttccaaccgttctgacagtcccaagctgcaccaatcaggtgtttttgcatccggagcaa
gatcgagtactaaccataagagaagccgcacggcttcaaggtttccctgattacttccag
ttctgtggaaccgttaaacaaaggtaccgtcagattggaaatgcagtggcggtctcggtt
tctcgtgctttgggttattctcttggtatggctttccgtggtctagccggtgatgagaat
atgatagaacttccccagaagttttctcattcaagttaccttcagcttcaagaaaccagt
cctcactag
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