KEGG   Raphanus sativus (radish): 108846964
Entry
108846964         CDS       T06014                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03020  RNA polymerase
rsz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108846964
  09124 Replication and repair
   03420 Nucleotide excision repair
    108846964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsz03021]
    108846964
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108846964
Transcription machinery [BR:rsz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108846964
  RNA polymerase III system
   RNA polymerase III
     108846964
  RNA polymerase I system
   RNA polymerase I
     108846964
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108846964
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF2226
Other DBs
NCBI-GeneID: 108846964
NCBI-ProteinID: XP_018475640
UniProt: A0A6J0MT42 A0A9W3CLQ8
LinkDB
Position
3:24863520..24865046
AA seq 206 aa
MSLSEEEIRMLFRVNKTLSQMLKDRGYIVTDSELEMTQEQFIEKYGVNMERKDLDTIKTK
KNNETDKIFVFFLQETKMCHIKPCFERMVSHNVFKAIIVVRKDMNRFAASAVTDANSKQK
LYLESFKETELLMNVKEHAFVPEHIALTTEEKEALLEKYTVKENQLPRIQYTDPIAKYYG
LKRGEVVKIIRKSETSGRYVTYRYVI
NT seq 621 nt   +upstreamnt  +downstreamnt
atgagtttatccgaagaagaaatcagaatgcttttcagagtcaacaaaacacttagccaa
atgctcaaagatcgtggctacattgtcactgattctgaacttgagatgactcaagaacag
tttatagaaaaatacggcgtgaacatggaaagaaaagatcttgatactattaagactaaa
aagaataatgaaactgacaagatctttgtcttttttctacaagaaacaaaaatgtgccat
atcaagccttgctttgagcgcatggtatctcataatgtcttcaaagcaattattgtcgtg
aggaaggatatgaaccgcttcgctgcatctgctgtaaccgacgcaaactcaaaacaaaaa
ctttacttggaaagttttaaggagacagagcttctgatgaatgtaaaagaacacgctttt
gttccggagcatatagctctgacaactgaggagaaggaagctttgttggagaaatacact
gtgaaagagaatcagcttccacgtattcagtatacggatcctatcgctaaatactatggg
ctaaaacgtggagaagttgtgaagatcatacgcaagagtgaaacatccggtcgttatgtc
acgtaccgatatgttatatga

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