Raphanus sativus (radish): 108848641
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Entry
108848641 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108848641
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00260
Glycine, serine and threonine metabolism
rsz00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01230
Biosynthesis of amino acids
Module
rsz_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108848641
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
108848641
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
108848641
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Gene cluster
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
108848641
NCBI-ProteinID:
XP_018477561
UniProt:
A0A6J0N0R1
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Position
4:29492869..29495211
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AA seq
500 aa
AA seq
DB search
MASQLLLPPNPFTKSASAKLFFTGDDSTLKRKSKHATRVSNGFSLRANAALRSNHSSSVE
IPSQWYNIVADLSVKPPPPLHPKTFEPIKPEDLAHLFPNEIIKQEATLERFIDIPEEVLE
IYKLWRPTPLIRAKRLEKLLQTPARIYFKYEGGSPAGSHKPNSAVPQAYYNAKEGVKNLV
TETGAGQWGSSLAFASSLFGLNCEVWQVANSYHQKPYRRLMMQTWGAKVHPSPSDLTEAG
RRILQDDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTVIGEECKKQMEAF
GETPDVIIGCTGGGSNFAGLSFPYIREKLKGKINPVIRAVEPSACPSLTKGVYAYDFGDT
AGLTPLMKMHTLGHDFIPDPIHSGGLRYHGMAPLISHVYEQGFMEAISIPQNECFQGAIQ
FARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLSSYDKYLKGELI
DLSFSEERVRESLSKVPHVV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaattgcttctgcctccaaacccattcaccaagtcagcctcagctaaactt
ttctttacaggtgatgactcaactctgaaaagaaagtcaaaacacgcaacaagagtttca
aatggatttagcttaagagcaaacgcagctttgagatccaaccatagctcatctgttgaa
atcccaagtcaatggtacaacattgttgctgatctttctgtcaagcctcctccaccattg
catcccaagactttcgaacccatcaaaccagaggatttagctcatcttttccctaatgag
ataattaaacaagaagcaactctagagaggtttatcgatatccctgaggaagttcttgaa
atctataagctttggcgtccaactcctctaatcagggcaaagaggttggagaagctcctt
cagacacctgcaaggatttacttcaagtatgaaggtggcagcccagctggttcacacaaa
ccaaactcagcagttccacaagcttattacaatgccaaagaaggtgtcaagaaccttgta
acggaaaccggtgctggccaatggggcagttctttagcctttgcttctagtctatttgga
cttaattgtgaagtgtggcaagtggccaattcataccatcaaaagccatatcgcaggcta
atgatgcaaacttggggggcaaaggttcatccgtcaccatcagatctcactgaagcaggt
agaagaatccttcaggacgatccatcaagcccgggaagtttaggcattgcaatttcagaa
gctgttgaagtggcagcaagaaacgaggatacaaaatactgtttagggagtgtattgaat
catgtgttgttacaccagacggttattggagaagaatgcaaaaagcagatggaagctttt
ggcgaaacgcctgatgtgatcatagggtgtactggtggaggatcaaattttgctggtttg
agttttccttatatccgggagaaactcaaaggcaaaatcaaccctgttattagagctgtt
gagccctcggcttgtccttccttgaccaaaggtgtttatgcttatgattttggcgataca
gctggattgactcctttgatgaagatgcatactttagggcatgacttcattcctgatcct
attcattccggtggattacggtaccatgggatggcaccgttgatctcacatgtttatgaa
caaggtttcatggaagcaatctcaattcctcaaaatgagtgtttccaaggtgctattcag
ttcgcgagaacagaagggataatacctgcgccagaaccgactcacgccattgcggcaacc
ataagagaagctctccgatgcaaagaaacaggagaagcaaaagtgatactaatggcgatg
tgtggacatggccactttgacctttcctcttacgacaagtatttaaaaggcgaactgata
gatttatcatttagcgaagagagggttcgagagtctttgtctaaggttcctcatgttgtt
tag
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