Raphanus sativus (radish): 108849513
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Entry
108849513 CDS
T06014
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108849513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108849513
04147 Exosome [BR:
rsz04147
]
108849513
04090 CD molecules [BR:
rsz04090
]
108849513
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108849513
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108849513
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108849513
CD molecules [BR:
rsz04090
]
Proteins
108849513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
AAA_29
AAA_21
AAA
AAA_18
RsgA_GTPase
AAA_15
PRK
AAA_28
AAA_30
ABC_ATPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108849513
NCBI-ProteinID:
XP_018478572
UniProt:
A0A6J0N1K1
LinkDB
All DBs
Position
4:complement(12120388..12127041)
Genome browser
AA seq
1243 aa
AA seq
DB search
MASREKTESVSSKSSCNMHVIFRFADWIDIILMVLGTVGAIGDGMSTNVALVFASKIMNS
LGYGQHNPHSTTFKDEVQKCSLYFVYLGLAILGVAFMEGYCWSKTSERQVEKIRRTYLKA
VLRQEVSFFETEDASVSEIIHTISTDTSLIQQLLSEKVPIFLMHTSVFITGLVFAAYFSW
RLTLVALPSLLLLLIPGLIYGKYLVYLSKKSYKEYAKANSIVEQALSSIKTILSFTAETQ
IIKSYSDILERHKKLGLKQGLAKGLAVGSTGISFTIWAFLAWYGSRLVMHKQETGGRIYA
AGISFILSGLSLGTALTEIKYFSEASVAAARICSRIDRVPEIDGEDTTKGFIPNAKIEGR
VEFEHVTFTYPSRPKSIILRDFTLRADAGRTVALMGASGSGKSTVIALLQRFYDPTEGFV
RIDGFDIKTLQLKWMREQIGVVSQDHALFGTSIKENIMFGKDNASMDEVISAAKAANADD
FITQLPDGYETQIGDRGALLSGGQKQRIAIARAIIRNPVILLLDEATSALDAESETLIQV
SLDQVATGRTTLVVAHKLSTVRGADLIAVLENGSVKEMGSHEDLMTKDNHYAKLINIQRQ
FSSHEHRQDLQEGVKTPEGRQYWSAKNSFNRLSIRSTPDLIASPIPFESIQAEEPDDNLP
STSFTRLLPLVSPEWKSSLLGCISAATFGAIQPIYALNIGGMISAFFAKSSQQMQDRIRI
YSLIFISLTFISMTLNLIQHYSFAKMGERLMQTLRLRMLEKIFTFEPAWFDVEENSSGEL
CSRLSNEASTVKSIVSDRISLLVQTISGVLIAMVIGLLVAWKLALVMIAVQPLSVLCFYT
KKVLLTSISRNYAYAQNRSSQIASEAVYNHKIVTSLGSTKKIIEIFDKAQDEARRKGEKA
AWLAGFGMGSAQCLTFMTWALDFWYGGVLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSM
TSDLAKGSAAISSVFKILDRPSAQDNTNHGAKIEEITGRIEVKKVDFSYPNRPSIPVLQQ
FSLDIKFGTSIGLVGTSGCGKSTVIALIQRFYDVEKGCVKIDGVDLREIDIKWYRKHTAL
VSQEPVVYSGSIRENILLGRPEAAEDEVMEAAKAANAHDFISAMEKGYETECGERGVQLS
GGQKQRLAIARAFLRNPVILLLDEVTSSLDSDSEQAVQEALAQIMASRKMTTVVVAHRLN
TLKKLDRIAVIADGTVVETGSYDRLKNMGGQFSRLLHAHDLKS
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgagagaaaaccgagtcagtatcatctaaatcgagttgtaacatgcatgta
atatttcggttcgcagattggatagatataattctaatggtacttggtacggtgggagcc
attggagatggcatgtccacaaacgtggcgttagtgttcgcaagcaaaattatgaatagc
ttgggctacggccaacacaaccctcattccactactttcaaggacgaggttcagaagtgc
agcttatacttcgtatacttgggactggctatcctaggagtggcatttatggaggggtat
tgttggagcaaaacaagcgagagacaagtggagaagattcgtcgaacatatcttaaagct
gttctccgacaagaagtttctttctttgaaacagaagatgcttccgtttctgaaattatt
cacaccatttccactgatacttctctcatccaacaacttcttagtgaaaaggtgcccata
ttcttgatgcacacctcagttttcattacaggcctcgtgtttgcggcttacttctcatgg
agattaaccctagtagcgctcccatcacttcttcttcttctaatcccaggattgatctat
ggcaaataccttgtttatttatctaagaaatcatacaaggaatatgccaaagcaaattcg
atcgtggaacaggctctaagctccatcaagaccattctttccttcacggctgagactcaa
atcatcaagagctactcagatatcttggaaagacacaagaagcttgggctaaagcaaggt
ctggccaaaggtttagccgtgggaagcacagggatctctttcaccatatgggcttttctt
gcgtggtacggaagcagattggtgatgcacaaacaagaaaccggtggacgcatttacgcg
gccgggatctctttcatcttgagtggcctttctctagggacggcactcactgagatcaaa
tatttctctgaggcttcagttgcggcagctagaatatgttcaaggattgatagggttcca
gagatagatggtgaagatacgactaaagggttcataccaaatgcaaagatcgagggtaga
gtagagtttgagcatgtaacctttacatatccttctcgtccaaaatctattattctcagg
gacttcactctgagagcagatgctggaagaaccgtagctctgatgggagctagtggaagt
ggtaagtcgacagttatcgcattgctgcaacggttctatgatccaacagaagggtttgtg
aggatcgatgggtttgacataaagactcttcagttaaaatggatgagagaacaaattggt
gttgtgagtcaagaccatgctttgtttgggacctccatcaaggaaaatattatgtttggg
aaagataatgcatcgatggatgaagtaatctcagctgcgaaggctgcaaatgcggatgac
tttattacacaactcccagatggttatgagacacagataggtgatcgtggagcactttta
tctggaggtcaaaagcaacggattgcaattgcacgtgccattattagaaatccagtgatt
ttacttttggatgaagcaacaagtgcactagatgcagaatctgaaacattgattcaagtt
tcacttgatcaagtggccacgggacgaaccacgctggtggtggcccataagctttcaaca
gtaagaggagcggatctcattgctgtgttagaaaatggttcggttaaagaaatgggttct
catgaagatttgatgaccaaggacaaccattatgcaaaactcataaacatccaaagacaa
tttagcagccatgaacatcgacaagatcttcaagaaggggtcaaaactcctgagggaaga
caatactggtctgccaagaacagtttcaacaggctaagcataaggtctacacctgatctc
attgcttctcccatcccctttgagagcattcaggcagaagaacctgacgataacctccct
tctacttctttcactcgacttcttccattggtctcccccgagtggaagtcatctctcctc
ggttgcatatcagctgcaacatttggtgcaatccaaccgatttacgccttaaacataggc
ggtatgatctctgcttttttcgccaaaagctcacagcaaatgcaggacaggattcggatt
tactccttaatctttatctccctcacctttatctccatgacccttaatctcattcagcat
tacagctttgccaagatgggtgaaaggctaatgcaaacacttcgtttgagaatgcttgaa
aagattttcaccttcgaaccagcctggtttgatgtggaagagaactctagcggtgagctt
tgttcaaggcttagtaacgaagcatccactgtgaagtccatagtatcagacagaatctcc
ttgctcgtccagaccatttcaggtgtcctaatagccatggtcatcggtctactagttgca
tggaaactcgcgctggtcatgatagctgtccagcctctctctgtcctttgcttctacaca
aagaaagttttactcaccagcatttcacgtaactacgcctatgcgcaaaaccgtagctcg
cagattgcatcagaagctgtttacaatcacaagattgttacatccttagggtcgacgaaa
aagattatagaaatatttgataaggctcaagatgaggcgagaagaaagggtgagaaggca
gcatggctcgcagggtttgggatgggttcggcgcagtgtctgaccttcatgacatgggcg
ttggacttttggtatggaggagtgctggttcaaaagggagagatctctgctggggatgtg
ttcaagacgttctttgttttggttagcaccggtaaggttattgcggaagcaggaagcatg
acttctgatcttgccaagggctcagccgccatatcttcggtcttcaaaatccttgaccgt
ccttcagctcaagacaatacaaaccatggagcaaagattgaagaaataaccgggagaata
gaggtaaagaaggttgatttctcttatccaaaccggcctagtataccagtgctccaacag
ttttccttagacatcaagtttgggactagcattggattggtcggtacatcagggtgcgga
aaatcaacagtgattgctttgatccaacgcttctatgacgtggaaaagggatgtgtgaaa
atagacggcgtagatttgagagaaatagatataaaatggtatagaaaacatactgcacta
gtgagccaagagccagtggtttattccggaagtatccgcgagaatattttgcttggacgg
cctgaagcggccgaggatgaggttatggaggctgctaaagccgccaatgctcatgatttc
atctcggcaatggagaagggatatgaaactgagtgtggagaaagaggagtgcagctatca
ggtggtcaaaagcagaggctagctatcgctagagcctttcttagaaatcctgtgatactt
ctacttgacgaggttacgagttccttagactctgactcagagcaggctgttcaggaagct
ctagctcagatcatggctagccggaagatgacaactgtagttgtggctcatcgcctcaac
accctgaagaaattggaccgcattgcggtaatagcagatggaaccgtagtggagacaggg
agctacgaccgcttgaagaacatgggaggccagttctcaagactccttcatgctcatgat
ctcaaatcttga
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integrated database retrieval system
