Raphanus sativus (radish): 108854229
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Entry
108854229 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108854229
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00052
Galactose metabolism
rsz00511
Other glycan degradation
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108854229
09103 Lipid metabolism
00600 Sphingolipid metabolism
108854229
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108854229
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108854229
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
BetaGal_gal-bd
Motif
Other DBs
NCBI-GeneID:
108854229
NCBI-ProteinID:
XP_018483245
UniProt:
A0A6J0NFC4
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All DBs
Position
4:47844796..47852346
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AA seq
1107 aa
AA seq
DB search
MASLATKMILPSENGYRAWEDQTLFKWRKRDPHVTLRCHDSVEGSLRYWYQRNNVDLTVS
KSAVWNDDAVQASLDSAAFWVDGLPFVKSLSGYWNFFLAPTPANVPEKFYDAAFSDSDWK
ALPVPSNWQCHGFDRPIYTNIVYPFLNDPPHVPEDNPTGCYRTYFQIPKDWKDRRILLHF
EAVDSAFFAWVNGNPVGYSQDSRLPAEFEISDYCYPWDSGKQNVLAVQVFRWSDGSYLED
QDHWWLSGLHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVKIDNMLESSKDLLLS
NFIIEAAVFDTKRWYKSGGFSDELSPKVANLKLNLSPSPVLGFHGYLLEGKLDTPNLWSA
EQPNVYILVVTLKDKSGKLLDSESSIVGIRQVSKAFKQLLVNGHPVMIKGVNRHEHHPRV
GKTNIESCMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLS
GHLKHPTKEPSWAGAMLDRVVGMVERDKNHACIISWSLGNEAGYGPNHSAMAGWIREKDP
SRLVHYEGGGSRTDSTDIVCPMYMRIWDIVKIALDKSESRPLILCEYSHAMGNSNGNIDE
YWEAIDNTFGLQGGFIWDWVDQGLLKMGSDGIKRWAYGGDFGDQPNDLNFCLNGLMWPDR
TPHPALHEVKHCYQPIKVSLTDGTIRVANAYFFNTTEELEFSWTVHGDGVELGSGTLSIP
VIKPQNSFDMEWKSGPWFSLWNDSNAGELFLTITAKLSNPTRSLEAGHLLSSTQIPLSSK
REIIPQVIKERDSVITCETVGDFIKISQQGSWELMINVQKGAIESWKVQGVLLMNEAILP
CFWRAPTDNDKGGGDCSYFSRWKAANLDNVEFIVESCSVKSTTDKAVEIEFIYLGSSASE
SSKSDALFKVNVTYIIYGSGDIITNWYVVPNSDLPPLPRVGIEFHLEKTLDRVEWYGRGP
FECYPDRKSAAHVGIYEHNVADMHVPYIVPGECGGRTDVRWVTFTNKEGVGIYASTYGSS
SPMQMNASYYTTDELDRATHEEDLIKGQSIEVHLDHKHMGIGGDDSWTPCVHDKYLIPPE
PYTFSIRLCPITAASLVLDMYKDQLPC
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctggcgacaaaaatgattcttccctcggagaatgggtacagagcttgggag
gaccagacccttttcaaatggcgcaagagagaccctcacgtcaccttgcgttgccatgat
tccgtcgaaggatctttgaggtactggtaccagagaaacaacgtggatctcactgtatca
aaatctgctgtttggaacgatgatgctgtgcaagcttctcttgatagtgctgctttttgg
gtcgacgggttaccctttgttaagtctttatctggttactggaacttcttcttggctcct
actcctgcaaatgtcccggagaagttttatgatgctgcgttttccgattcggattggaaa
gctttaccagttccttccaattggcagtgtcatggctttgatcggcctatttataccaat
attgtgtatcctttcctgaatgatcctcctcatgttcctgaagataaccctactggttgc
tacaggacttacttccagattcctaaagattggaaggacagaagaatacttcttcacttt
gaagctgtagactccgcattctttgcttgggtgaatggcaaccctgttgggtacagtcaa
gacagcagattaccagctgaatttgaaatatccgactattgctatccatgggactccggg
aaacaaaatgttcttgctgtccaagtctttagatggagtgatggttcataccttgaagac
caagatcattggtggttgtcaggccttcaccgagacgtgcttttgctagcaaagcccaag
gtcttcattgctgactacttttttaagtccaaattagcagatgacttttcatacgcggac
atccaggttgaagtaaagatagacaatatgctggagtcctcaaaggatcttcttctatct
aacttcatcatagaggctgccgtatttgatactaaaagatggtacaaatctggaggattt
agtgatgaactttctcccaaggtggctaatctgaagcttaatctttctccaagcccagtt
cttggatttcatggttatttgcttgagggaaaactggatactccaaatctctggtcagca
gaacaaccaaatgtctacatcctcgttgtaaccctgaaagataaatctgggaaactcctt
gattctgagtctagcattgttggcattcgccaagtatcaaaggccttcaaacagcttctt
gttaatggacatccggtcatgattaaaggtgtaaacaggcatgagcaccacccacgtgtt
ggaaagactaacatagagtcatgcatggtcaaggatttaatcatgatgaaagaatacaat
atcaatgctgtgcggaacagtcattatcctcagcatccccgctggtatgaattatgtgat
ttgttcggcatgtacatgatcgatgaagccaatatagagacacatggttttgatctttct
ggacatctgaagcaccctacaaaagaaccaagctgggcaggtgctatgttggatcgtgta
gttgggatggtcgagagagacaagaaccatgcctgcataatttcttggtcactgggaaac
gaagcaggctatgggcctaatcattctgccatggcaggttggattagggaaaaggacccc
tcacggttggtacactatgaaggtggtggttccagaacagattctactgatatagtctgc
cctatgtacatgcggatttgggatattgtcaagattgcacttgataaaagtgaatcacgt
ccgttgatattatgcgagtattcacatgctatgggtaatagcaacgggaatatagacgag
tactgggaggcaattgataatacctttggcctgcaaggaggcttcatatgggactgggtt
gaccagggtctattgaagatggggtcagatggcattaagcgttgggcttatggaggggac
tttggtgaccaacctaatgatctgaacttctgtctgaatgggcttatgtggcctgaccga
acgcctcatccagcactccatgaggtcaagcattgttatcaaccaatcaaggtttcattg
actgatggcacaataagggtagcaaacgcttactttttcaatacaacagaagagttggag
tttagctggacagttcatggggatggtgttgaacttggatctgggactctctctattcct
gtgataaagccacagaatagttttgatatggagtggaagtcaggtccatggttttcttta
tggaatgactcaaatgctggagaattgtttctgacaataactgccaagctatcaaatcct
acccgttcacttgaagctggtcatctcttgtcttcaacgcagattcctttatcgtcaaag
agagagataataccacaggtgataaaagagagagactctgtcatcacttgtgaaactgtt
ggagatttcattaagatcagtcagcaaggttcatgggagctaatgataaatgtccaaaaa
ggagccattgaaagctggaaggtgcaaggagttctacttatgaatgaagctatactgcca
tgcttctggcgagcacctacagacaatgataaaggtggaggtgactgtagttacttttca
aggtggaaagcagcaaacttggacaatgttgagttcattgttgaaagctgttcagtaaag
agcaccactgataaagccgttgagatagagttcatctaccttggttcttcagcttctgag
tcttcaaaatcagacgccttgttcaaagtcaatgtgacatatatcatctatggttctgga
gatatcatcacaaattggtatgtagtcccaaactctgatcttccaccgctaccacgggtt
ggtatagagtttcacctcgagaaaacactggaccgtgtggaatggtatggaagaggtcca
ttcgagtgttacccagaccgaaaatcagcagcccatgtggggatatatgaacacaacgtt
gcggacatgcatgtaccttatattgttccaggagaatgtgggggtagaacagatgttagg
tgggtgacattcacaaacaaagagggtgtgggaatatatgcttcaacatatggtagctct
tctccaatgcagatgaatgctagctattacacaaccgatgagcttgatcgtgcaacgcat
gaagaggatcttatcaaaggacaaagcattgaggtgcatctggaccataaacatatgggt
attggaggagatgatagctggaccccttgtgttcatgataagtatctgattccaccagaa
ccatacacattctctatcaggttgtgtcccattaccgcagcgagtttggtcttggacatg
tacaaggatcagcttccctgctag
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