Raphanus sativus (radish): 108854862
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Entry
108854862 CDS
T06014
Name
(RefSeq) beta-galactosidase 2
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00052
Galactose metabolism
rsz00511
Other glycan degradation
rsz00531
Glycosaminoglycan degradation
rsz00600
Sphingolipid metabolism
rsz00604
Glycosphingolipid biosynthesis - ganglio series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108854862
09103 Lipid metabolism
00600 Sphingolipid metabolism
108854862
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108854862
00604 Glycosphingolipid biosynthesis - ganglio series
108854862
00511 Other glycan degradation
108854862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108854862
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108854862
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108854862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
GHD
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
108854862
NCBI-ProteinID:
XP_018484029
UniProt:
A0A6J0NHM1
LinkDB
All DBs
Position
4:45989931..45996083
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AA seq
727 aa
AA seq
DB search
MVMSFRDKACFFLAIMCFSLLIFSTKALVSYNHKALVLNGQKRILLSGSIHYPRSTPEMW
PDLIKKAKEGGLDVIQTYVFWNGHEPSPGQYYFEDRYDLVKFIKLVQQAGLYVSLRIGPY
VCAEWNFGGLPVWLKYVPGMVFRTDNGPFKIAMQKFTKKIVDIMKEEKLFETQGGPIILS
QIENEYGPMEWEIGSAGKAYTKWTAAMALGLSTGVPWVMCKQDDAPYPIINTCNGFYCEG
FKPNSVNQPKMWTENWTGWFTEFGGAIPNRPVEDLAFSVARFIQNGGSFMNYYMYHGGTN
FDRTSGEFITTSYDYDAPLDEYGLLREPKYSHLKELHKVIKLCEAALVSVDPTITSLGSK
QEAHVFKSKTSCSAFLSNYDTNNPARVMFRGFPYDLPSWSISILPDCKTEYHNTAKIRSP
NMPMKMVPTSTRFSWESYNEAIPSSSDYGTFARDGLLEQISMTRDKTDYFWYLTDITISS
DERFLKTGEDPLLTICSAGHALHVFVNGQLAGRSYGALSSPKLTFSQKIKLRAGVNKLAL
LSTAVGLPNAGVHYETWNTGVLGPATLNGVNSGTWDMSKWKWSYKIGTKGEAMSLHTLTG
SSSVEWTEGSLVALKQPLTWYKSYFNAPVGNEPLALDMSKMGKGQVWVNGRNIGRHWPAY
TAHGNCGRCNYAGIYNEKKCLSNCGQSSQRWLHMPRTWLKPSGNLLVVFEEWGGDPSGIS
VVKRTNK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggttatgagttttagggataaagcttgtttttttctggcgattatgtgtttttcattg
ttgatcttctcaactaaagcattggtgtcttataatcataaagctttagtcctcaatgga
cagaaaaggatccttctctctggttccatccactacccaagaagcactcctgagatgtgg
cctgatcttataaagaaggccaaagaaggtggtttagatgttatacagacttatgttttc
tggaatggacatgaaccttctcctggacaatattatttcgaggataggtatgatctggtc
aagttcatcaagctagtgcaacaagctggtctatatgttagtctgagaattggtccatat
gtttgtgccgagtggaattttggaggccttcctgtttggctcaaatatgtccctggtatg
gttttcaggacagataatggacctttcaagattgcaatgcaaaaattcacaaagaagatt
gtggatataatgaaagaagaaaagttgtttgaaactcaaggagggcccatcattctctca
cagatagagaatgagtatggaccaatggagtgggagataggatcagcaggaaaggcatac
acaaaatggacagctgcaatggcgttgggtttgtccacgggtgtcccatgggttatgtgc
aagcaagatgatgccccttaccctattataaacacatgcaacgggttttattgtgagggt
ttcaaaccaaactcagtcaatcagcccaagatgtggacagagaactggactggttggttc
actgaatttggaggtgcgataccaaacagaccagtcgaagacctagcgttttccgtggcc
cgctttatacagaacggtggttcctttatgaattattacatgtatcatggaggaacaaac
tttgatagaacatctggtgagtttatcaccacgagctatgactacgatgctcctctcgat
gaatatggattactgagagaacccaagtatagtcacttgaaagagttgcataaagtcata
aaactatgtgaagctgcgttggtttctgttgatcccaccattacatcgctcggcagtaag
caagaagctcatgtgttcaagtccaagacttcttgctctgcgtttctttcgaattacgac
acgaacaatccagcaagagtgatgtttaggggatttccgtacgatttgccctcttggtct
attagtattttacctgactgcaaaaccgagtatcacaacactgcaaagattcgttcaccg
aacatgcccatgaagatggttcctactagcacgcgattttcatgggaatcatacaacgaa
gcaatcccttcttcaagtgactatggtacgtttgctcgagatggtctgttggaacaaata
agcatgaccagagacaaaacagactacttctggtatcttacagacattacaatcagttct
gatgagaggttcttgaaaactggtgaagatccacttcttaccatttgttcagctgggcat
gctcttcatgtatttgttaatggtcagcttgcaggaagaagttatggagcgttgagtagc
cccaagctcacatttagtcaaaagatcaaattgcgcgcaggggtcaacaaacttgctctc
ctaagtacggcagtgggtcttccgaacgcaggtgtgcactatgagacttggaatacagga
gttctaggtccagccacactgaatggagttaactctggaacatgggacatgtctaagtgg
aaatggtcctataagatcggtaccaaaggtgaagctatgagccttcataccttaaccggg
agttcctctgtggaatggacagaaggatcactcgtggccttgaagcaaccattgacctgg
tacaagtcttattttaatgcgccggtaggcaatgaaccattggcattggacatgagcaaa
atgggaaaaggacaagtatgggtaaatggacgcaacataggacgtcattggcctgcctac
acggctcatggtaactgcggacgctgcaactatgctggaatttacaacgagaagaaatgt
ctcagtaattgtggccaatcttctcaaagatggttacatatgcctcgtacatggcttaag
ccgtctgggaaccttctagttgtctttgaggaatggggtggtgatccaagtgggatctct
gttgttaaaagaacaaacaaatga
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