Raphanus sativus (radish): 108855905
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Entry
108855905 CDS
T06014
Name
(RefSeq) malate dehydrogenase 1, peroxisomal
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00020
Citrate cycle (TCA cycle)
rsz00270
Cysteine and methionine metabolism
rsz00620
Pyruvate metabolism
rsz00630
Glyoxylate and dicarboxylate metabolism
rsz00710
Carbon fixation in photosynthetic organisms
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
Module
rsz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rsz_M00012
Glyoxylate cycle
rsz_M00168
CAM (Crassulacean acid metabolism), dark
rsz_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108855905
00620 Pyruvate metabolism
108855905
00630 Glyoxylate and dicarboxylate metabolism
108855905
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
108855905
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108855905
Enzymes [BR:
rsz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
108855905
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3Beta_HSD
Semialdhyde_dh
Epimerase
DapB_N
DUF6245
Motif
Other DBs
NCBI-GeneID:
108855905
NCBI-ProteinID:
XP_018485334
UniProt:
A0A6J0NL19
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Position
4:complement(33461344..33463518)
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AA seq
353 aa
AA seq
DB search
MDANQRIARISAHLNPPNLDKNGSGSDLRRVGCRAKGGSPGFKVAILGAAGGIGQPLAML
MKMNPLVSLLHLYDVANAPGVTADISHMDTSAIVRGFLGQPQLEEALTGMDLVIIPAGVP
RKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP
KKLMGVTMLDVVRANTFVAEVMSLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTQKEI
EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDANIVECAFVASHVT
ELPFFASKVRLGRCGVDEVYGLGPLNEYERMGLEKAKKELGGSIAKGVTFVKK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaccaacgaatcgcaagaatctctgctcatctcaaccctcctaatctcgat
aagaatggttccgggtcggatctgagacgggtgggttgtcgggcaaaaggcgggtctccc
ggattcaaagtggcgatacttggagcagcgggagggataggacagccactagcgatgttg
atgaagatgaatcctctggtctcgcttctccatctctacgacgttgctaacgctcctggt
gtcaccgctgatattagtcacatggacactagtgccatcgttcgtggatttctcgggcaa
ccgcagttagaggaggcactcacgggtatggatctagtgattataccagctggagttccg
aggaagccagggatgacgagggatgatcttttcaacatcaacgccggcattgtcaggacg
ctctccgaagctatagccaagtgctgtcccaaagcgattgtgaatatcatcagtaatccg
gtgaactccacggtgccgatcgcagcggaggttttcaagaaagctggtacttttgatccg
aagaaactcatgggagtcaccatgcttgatgttgttagagctaatacttttgtggcggaa
gtaatgagtcttgatcctcgagaagttgatgttccagttgttggaggacacgcaggagtt
acaatcttgcctctgctttctcaggtgaaacctccttgctctttcactcagaaagagatt
gaatatctcacagaccgcatccaaaatggtggcactgaagttgtcgaggcaaaagctggt
gcaggttctgcaacactatcaatggcttacgcagcagtgaagtttgcagatgcttgtctc
aggggtctacgaggcgatgcaaacattgtcgagtgtgcatttgtggcatctcatgtgact
gagcttcccttcttcgcatcaaaggtgcgtctaggaagatgtggggtagatgaagtgtac
ggtctcggaccattgaacgaatacgagaggatgggattagagaaggcaaagaaagagctt
ggagggagtattgcgaaaggtgttacctttgtcaagaagtag
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