KEGG   Raphanus sativus (radish): 108857066
Entry
108857066         CDS       T06014                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108857066
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108857066
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108857066
Enzymes [BR:rsz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     108857066
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     108857066
Protein phosphatases and associated proteins [BR:rsz01009]
 HAD phosphatases
  Other HAD phosphatases
   108857066
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108857066
SSDB
Motif
Pfam: PNK3P zf-PARP Hydrolase HAD_2 Hydrolase_6 Hydrolase_like RB_A
Other DBs
NCBI-GeneID: 108857066
NCBI-ProteinID: XP_018486494
UniProt: A0A6J0NP86
LinkDB
Position
5:36757008..36760301
AA seq 505 aa
MVLASFVSRHSHSLPPLLIHQSNLFLLRQRGRNYLRHRYIWISTEKMPIVAEYAKSNRSS
CKACSKSIATKTLRLGLISKGPGGFDMTRWHHLDCFPSDSESIASVDDIKGLSALEKDDQ
DALAKLVEQCGQPSNQQVDEKVEEITHLATDDVSGEKIKETKGSSKVIAEYAKSSRSSCK
KCSQTIAAKELRLGLVTRDSRGFDMTKWHHLACFPVDSDPVDSVEDIGGFSSLQSGDQDA
LKDLVQQCENKTLLTEETNKRKHSQVGEMEMVEETNTSQPTTRKPKMNTSESTSQVVGEA
EISLSASDVKEKYRDARLLPKWKAFETVIFLERDEGLNDSEKIAAFDFDGCLAKTSVKVV
GADAWSLMYPSIPEKLQSLHSQGYKLVIFTNESNIDRWKNKRQAAVDSKIGRLNSFIKRV
EVPIQVFIACGVASSGGKDDLYRKPKPGMWQLMKKHLNSGIEIDMDESFYVGDAAGRKGD
HSDADIKFAQASGLKFYTPEEYFLS
NT seq 1518 nt   +upstreamnt  +downstreamnt
atggttttagcctccttcgtctctcgacactctcactctctccctcctctgctcatccat
cagtccaatctatttctcctccgtcaacgaggacgaaactatctccgccaccgttacatt
tggatttcaacggagaaaatgccgatcgtagccgagtacgcgaagtcgaaccgatcttcc
tgcaaggcatgctcgaagtcaatcgcgacgaaaacactaagactaggattgattagcaag
ggacccggcgggttcgacatgaccagatggcaccatctggattgtttccctagcgattcg
gagtcgattgcttccgtcgacgatatcaaaggcttatccgctttagagaaagatgatcaa
gatgcgttggcgaaattggtggaacagtgtggtcagccttctaaccaacaggtcgatgag
aaggtggaagagattacacatctcgcaacagatgatgtaagtggggagaagattaaggag
acgaaaggttcttcaaaagttattgctgagtacgcgaaatcaagcaggtcatcgtgcaag
aagtgctctcagactattgctgcaaaggaactgagattggggctggtgaccagagactcc
cggggtttcgatatgacgaaatggcaccacttggcttgtttccccgttgactcagatccg
gttgattctgttgaggacattggtggattttcgtcactgcagagtggtgatcaggatgca
ttaaaggatttggtccaacaatgcgagaacaagaccttgctaacggaagagacaaacaaa
agaaaacattctcaggttggggagatggagatggtggaagaaaccaacacgagccaaccg
actactagaaaacccaagatgaacaccagtgagtcaacttctcaggtcgtaggtgaagca
gagatctctctttcagcatctgatgtgaaggaaaagtacagggatgccagactattaccg
aagtggaaagcgtttgagactgtaatattccttgagcgggatgagggtcttaacgattct
gagaagatagctgcatttgattttgatggatgcctagcaaaaacatctgtgaaagtagta
ggtgcagatgcatggtcccttatgtacccttctattcctgagaaactacaaagtcttcat
agtcaaggctataagctggttattttcacgaatgagtccaacattgaccggtggaagaac
aaaagacaagctgctgtggactcgaaaattggacgcctcaacagttttatcaagcgcgtg
gaggttcccattcaggtgtttatagcgtgtggagtcgcaagttctggtggtaaagatgac
ctttaccgcaaacccaagccaggaatgtggcaactcatgaagaagcacctcaactctggg
attgaaattgatatggatgaatctttctatgtcggggatgcagccggaagaaaaggcgat
cacagtgacgcagatataaaatttgcacaggctagtggattgaagttttacaccccagag
gagtactttctctcttga

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