Raphanus sativus (radish): 108857876
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Entry
108857876 CDS
T06014
Name
(RefSeq) protein EXPORTIN 1B-like
KO
K14290
exportin-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
rsz03013
Nucleocytoplasmic transport
rsz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108857876
03008 Ribosome biogenesis in eukaryotes
108857876
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108857876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108857876
03009 Ribosome biogenesis [BR:
rsz03009
]
108857876
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108857876
03036 Chromosome and associated proteins [BR:
rsz03036
]
108857876
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108857876
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108857876
Pre-60S particles
108857876
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108857876
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108857876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
CRM1_repeat_2
CRM1_repeat_3
Glyco_hydro_38
BID
Motif
Other DBs
NCBI-GeneID:
108857876
NCBI-ProteinID:
XP_056841956
UniProt:
A0A9W3BS03
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All DBs
Position
5:908017..912105
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AA seq
646 aa
AA seq
DB search
MVYFPPTVDRIEPEVTTTKILYSDQISKLRGLMIARMAKPEEVLIVEDENGNIVRETIKD
SDVLFQYRIMRETLICLTRFDRDDTERQMFRKLSQQINREEWTWNNLNTLCWAIGSISGS
MDVKHEEEFVMRVIRALLSFCEIMTGNDNKAVIASNVMYVFGQYSRFLKGNWEYLVVVVK
KLFDFMHSTHPGVKDMACDTLLKIVRKCKHIFLVVQVRDHDEEPFISDILASLKTIIRDL
EPNQMHTFYESLACIIQAESDPHKMGEYIQRLMALPNQRWVEIIREACRNADFLKDPDVI
RDVLTILETSTRVATSLGTHFFSQMSLIFLDMLNIYKMYSELVSIYIGDSVMYASKISVV
KLLRSVTREILKLIKTLIDKDETESQIGKKFVPLMMDVVLGGYARNVPDARESEVLSLFA
TIIKQYKVAMQNDVPHIFEFVFHCTLEMITKNFEDYPEHRLKFFSLLRAIAAYCFHTLLQ
LSSEELKLLMDSVIWAFRHTEKNIAGTGLKLLLVLMKKFQKSDFSNQFYRTYFMQIEQEI
IAVLTDTFHKPEFELHVLVLQHLFSLVESGSLTEPLWDASTAPYQYPNNAAFVCEYTIKL
LSSSFPNISVSEVTQSAKELYRLRSHPDIFKNHLRDFLIQSKEFSA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggtttattttcctcctacggttgatcgcatcgaacctgaagtcacaacaacaaaaata
ctttactctgatcaaatatcaaaattgagggggctcatgattgctcgcatggctaagcct
gaagaagtgctaattgttgaagatgaaaatgggaacattgtccgtgaaactataaaggat
agcgatgttcttttccagtataggataatgcgggagacattgatctgcctcacacgcttt
gatcgtgatgataccgaaagacagatgtttcgtaagctaagccaacagataaacagagaa
gagtggacatggaataatctgaacactttgtgctgggctattgggtctatttctggttcc
atggatgtaaaacatgaagaagagtttgtaatgagggttattcgtgctttattaagtttc
tgtgaaatcatgacgggaaatgacaataaagctgttatcgcgagcaacgtcatgtatgtt
tttggacagtattcaagattcttaaagggcaattgggagtatttggtagtggttgttaag
aagttgtttgacttcatgcattcgactcatccaggtgttaaggacatggcttgtgataca
ctcttaaagattgttcggaaatgcaaacacatattccttgttgttcaggttcgagatcat
gacgaggagccatttatatctgatattctagcaagccttaaaacaattattcgagatctt
gagccaaatcagatgcacactttttatgaatctcttgcttgtataatccaggctgaatca
gatcctcataagatgggtgaatacattcagaggttgatggctctccctaatcagagatgg
gtagagattatacgagaagcatgtcggaatgcagatttcctcaaagaccctgatgtgata
cgggatgtgcttactatcctcgagacaagtacgagagttgcaacttcactaggaacacac
ttcttttctcaaatgtcattgatcttcttggatatgctgaatatttacaaaatgtacagt
gaactcgtatcaatctacataggtgatagtgttatgtatgcttcgaagatatctgttgtt
aagcttctaagatctgttacgagagaaatcctgaagctgataaaaacgttaatagacaaa
gatgaaaccgagtcacaaattggcaaaaagtttgttccattaatgatggatgtcgtactt
ggtggctatgcaagaaatgttcctgatgcaagggaatcagaagttttatcactctttgcg
acaataataaagcagtacaaggttgcaatgcaaaatgatgtccctcacatttttgaattt
gttttccattgcactttggagatgatcactaagaactttgaagattatccagaacaccgg
ctcaagtttttctcgttacttcgtgccattgctgcatattgtttccataccttgctacag
ttgtcaagtgaggaactgaagctattgatggattcagttatctgggcgtttaggcataca
gaaaaaaacattgctggaaccgggcttaaactcttactggtgttaatgaaaaagtttcag
aaatctgacttctctaaccaattctaccggacatactttatgcaaattgagcaagaaatt
attgccgtgttgaccgatacctttcacaagccagagttcgagttgcatgtgttggtgcta
cagcatctattttcactggtagagagcggttctttaacagaacctttatgggatgcttcc
actgcaccttatcagtatccaaataatgccgcctttgtttgtgaatacaccatcaagctt
ctaagctcatcattccccaacataagtgtatcagaggtgacacaatctgcgaaagaactt
tatcggttgagaagtcaccctgatatatttaagaatcacttacgagacttccttatacag
tccaaagaattttctgcatag
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