Raphanus sativus (radish): 130494806
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Entry
130494806 CDS
T06014
Name
(RefSeq) ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130494806
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130494806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
130494806
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
130494806
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
130494806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
SMC_N
AAA_22
DEAD
nSTAND1
Mg_chelatase
AAA_30
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130494806
NCBI-ProteinID:
XP_056865690
UniProt:
A0A9W3DPD9
LinkDB
All DBs
Position
4:complement(218..1542)
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AA seq
920 aa
AA seq
DB search
MAVSRELSGDDKTSLQRNRSRNYLTEASYVEFSGVKVVTPTGNVLVEDLTLRVEQGSNLL
ITGPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYMAVGTLRDQLIY
PLTSDQETVPLTETGMVELLENVDLEYLLDRYRPDKEVNWGDELSLGEQQRLGMARLFYH
KPKFAILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSV
HYKRDDSAPLTDAGVDSAKISENDRQNDAMVVQRAFAAARKESATTNSKAQAYLTQSIAK
SPVVDKSVVLPRFPQPRTSPRALPLRVAAMLNTLIPTLFDKQGGQLLLVACLVVSRTLIS
DRIASLNGTTVKYVLEQDKAAFVRLIGLSVIQSSASAVIAPSLKHLTQRLALGWRIRLTQ
HLLRNYLRNNAFYKVFHMSGNTIDADQRLTRDLEKLTTDLSGLLTGMVKPSVDILWFTWR
MKLLTGQRGVAILYTYMLLGLGFLRRFAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIA
FFGGGAREKAMVDTKFRALLDHSLMLLKKKWVYGILDDFVTKQLPNNVTWGLSLLYALEH
KGDRALVSTQGELAHALRYLASVVSQSFMAFGDILELHKKFLELSGGINRIFELDEFLDA
SQSGVTSDNHRSRLDSQDRISFSEVDIITPAQKLMASKLSCEIVSGKSLLVTGPNGSGKT
SVFRVLRDIWPTVCGRLFKPSLDIKELGSGNGIFFVPQRPYTCLGTLRDQIIYPLSKEEA
EKRAAKLYTNGDSSAEAGSILDVHLKTILENVRLVYLLERDESGWDATTNWEDILSLGEQ
QRLGMARLFFHRPKFGILDECTNATSVDVEEQLYRVAKDMGVTFITSSQRPALIPFHSLE
LRLIDGEGNWELRSIEQTTE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcgagagaactcagtggtgatgataaaacatctttacagagaaatagaagc
agaaattaccttactgaggctagctatgttgagttttcgggtgtcaaggttgttactcca
acgggaaatgttttggtggaggatctcacccttcgagttgagcaaggatctaatcttctt
attacaggtcctaatggaagtggcaagagttcccttttccgagtactaggaggtctatgg
cccctggtgtctggccacattgtgaagcctggagttggttctgatcttaacaaagagatc
ttctacgtgccccaacggccctatatggcagttggaacacttcgtgaccagttaatatat
cctcttacgtctgatcaagagactgtaccgctcactgagactggaatggtggagctattg
gaaaatgttgacctagaatatttattggatcgctaccgacctgacaaggaggttaattgg
ggtgatgaattatctcttggagagcaacagagattgggaatggccagactgttctaccac
aaacctaaatttgcaattcttgatgagtgcacgagtgctgtgacaactgatatggaagaa
cgttttgctgctaaggttcgagctatgggaacttcttgcataacaatctcccatcgtcca
gcccttgttgcattccatgacgttgttctgtcattagatggagaagggggatggagtgtt
cactacaagagggacgactctgcacctctgacggacgctggagttgattcagcgaaaatt
tcagagaacgatcgtcaaaatgatgcgatggttgttcaacgagcgtttgctgcagctaga
aaggaatctgccactactaattcaaaggctcaggcgtacttgacacagtcaattgcaaaa
tcaccagttgttgataaaagtgttgtgttgcctcgttttcctcaacctcgaacatcgcca
agggcgttgccattaagagtagctgcaatgttaaacacattgatacccactctatttgac
aaacaaggaggacaactgcttttggttgcttgccttgtcgtctcaagaacattaatctct
gaccgaatagcctctttgaatgggaccactgtgaagtatgtcttggagcaagataaagcc
gcatttgttcgtttgattggtttgagtgttatccaaagtagtgcatctgctgtcattgct
ccttcattaaagcatctaacgcagaggctagctttagggtggaggattcgtttgactcaa
catctgctacggaattacttgagaaataatgcgttttacaaggttttccacatgtcaggc
aatactattgacgcagaccagagactcactcgtgacctggaaaagttaaccactgacttg
tctggacttcttactggaatggttaagccatcggttgatattctgtggttcacctggagg
atgaagctattgactggtcaaaggggagttgccatactttacacatatatgttacttggt
ctgggtttcctgagacgttttgctcccgattttggtgatctagccggtgaagaacagcag
cttgaggggaaatttaggtttatgcacgagagactgaacactcatgctgaatccattgcc
ttctttggaggcggagctcgagaaaaagctatggttgacacaaaattcagggcactactg
gaccactctctcatgctcctgaagaagaaatgggtgtatggcatacttgatgatttcgtg
acaaagcaacttcccaataatgtgacttggggattgagtttgttgtatgccctagaacac
aagggagacagagcacttgtctccactcaaggtgaattggcacatgcattgcggtatcta
gcttccgttgtctctcaaagctttatggcgtttggtgatattcttgaactacacaagaag
ttccttgagctctccggtggtattaacagaatttttgagctggatgagtttttggatgct
tctcagtcaggtgttacctcagataatcacagaagccgtttggattctcaagatcgaatt
tccttttcagaggtggatatcattacccctgctcagaaattgatggctagcaagttgtca
tgcgaaatagtttcggggaaaagcctactcgtcacaggtccaaacggtagtggaaagact
tccgtatttagagtccttagagatatatggcccactgtatgtggaagacttttcaaacca
tcattggatatcaaagagcttgggtcagggaatggcatattttttgtccctcagcgacct
tatacatgtttagggacgctgagagatcagattatataccctctatctaaagaagaagca
gagaaaagggcagcaaagttgtacaccaatggagatagctcagctgaagctggaagcatt
ctggacgttcatttgaaaaccatcctggagaatgttcggttagtttatctcttggaaaga
gatgaaagtggttgggatgctactaccaactgggaagacatactatctcttggagagcaa
cagaggctaggcatggcacgtttattctttcacagaccgaagtttggaatccttgatgaa
tgcaccaatgcaacgagtgttgatgttgaggaacagctctacagggttgcaaaagacatg
ggagttactttcataacctcatcccaacgtccggctttgatcccgttccactccttggag
ctaaggctgatcgatggagaaggaaactgggagctacgttctatcgagcagacaacagag
tag
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