Raphanus sativus (radish): 130498790
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Entry
130498790 CDS
T06014
Name
(RefSeq) ABC transporter D family member 1-like isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130498790
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130498790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
130498790
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
130498790
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
130498790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
SMC_N
AAA_22
DEAD
nSTAND1
AAA_18
AAA_30
Motif
Other DBs
NCBI-GeneID:
130498790
NCBI-ProteinID:
XP_056848370
UniProt:
A0A6J0KS65
LinkDB
All DBs
Position
8:7051797..7060059
Genome browser
AA seq
1332 aa
AA seq
DB search
MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGAAAYLKSRISSRSSSRHCNGHSDDD
EALEKTTGKDKKPAKKKKGGGLKSLQVLTAILLSQMGKMGARDLLALVGTVVFRTALSNR
LAKVQGFLFRAAFLRRAPLFLRLITENIILCFMLSTMHSTSKYITGALSLRFRKILTKLI
HSHYFENMVYYKISHVDGRITHPEQRIASDIPRFSSELSELIQDDLTAVTDGILYAWRLC
SYASPKYIFWILAYVLGAGTAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSESIAFY
GGETREESHIQQKFKNLVSHMSVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFSGHL
RPDDSTLGRAEMLSNIRYHTSVIISLFQALGTLSISSRRLSRLSGYADRIHELMAVSREL
SGDDKVSFQRNRSRNYLSEANYVEFSGVKVVTPTGNVLVEDLTLRVEQGSNLLITGPNGS
GKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYMAVGTLRDQLIYPLTSDQE
SVPLTETGMVELLKNVDLEYLLDRYQPDREVNWGDELSLGEQQRLGMARLFYHKPKFAIL
DECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVILSLDGEGGWNVYYKRDDS
VLLTDAGDDSVQISDTNRQNDAMVVQRAFAAARKESASKAQSYLTQLIEKSPVVDKSVVL
PRFPQPRTSPRALPLRVAAMLNTLIPTLFDKQGAQLLLVACLVVSRTLISDRIASLNGTT
VKYVLEQDKAAFVRLIGLSVLQSGASSVIAPSLKHLTQRLALGWRIRLTQHLLRNYLRNN
AFYKVFHMSGNSIDADQRLTRDLEKLTHDLSGLLTGMVKPSVDILWFTWRMKLLTGQRGV
AILYTYMLLGLGFLRRVAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIAFFGGGAREKA
MVDTKFRALLDHSLMLLKKKWVYGILDDFVTKQLPNNVTWGLSLLYALEHKGDRALVSTQ
GELAHALRYLASVVSQSFMAFGDILELHKKFLELSGGINRIFELDEFLDASQSGVTSDNH
RSRLDSQDRISFSEVDIITPAQKLMASKLSCEIVSGKSLLVTGPNGSGKTSVFRVLRDIW
PTVCGRLFKPSLDIKELGSGNGIFFVPQRPYTCLGTLRDQIIYPLSKEEAEKRAAKLYTN
VTGDSSAEAGSILDVHLKTILENVRLVYLLERDESGWDATTNWEDILSLGEQQRLGMARL
FFHRPKFGILDECTNATSVDVEEQLYRVAKDMGVTFITSSQRPALIPFHSLELRLIDGEG
NWELRSIEQTTE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctccagctattgcagttaactgagcggggtcggggtcttgtagcttcaaga
cggaaatctatactgcttgcggctgggattgtagctgccggtggagctgcggcatacttg
aaatcaaggatcagctcccgttcttcttcgcggcattgcaatggacatagtgatgatgac
gaggcattggaaaagacgacgggaaaagataagaaacccgctaaaaagaagaaaggagga
ggattgaagtctctacaggttctgactgcgattcttctgtctcagatggggaaaatgggt
gccagggatcttctcgcacttgtgggcaccgtggttttcagaactgctttgagcaatcgg
ttggcgaaagttcaaggtttcctattccgtgctgctttcttaaggcgcgccccactgttt
ctacgtctcatcaccgagaatattatcttgtgtttcatgctgtccacgatgcactctaca
tcaaagtacatcactggggccttgagtttacggttcaggaagatattgacgaaacttatc
cattcgcattatttcgagaacatggtgtactataaaatatcacatgtggatggtcggatt
acgcatcccgagcaacgaattgccagtgatataccgagattctcctcggagttgagcgaa
cttattcaggatgatttgacggcggttactgatggaattttgtatgcatggcgtctgtgt
tcatatgctagtccaaaatacatcttctggatactggcatatgtactaggagccggtact
gcgataaggaacttttctccttctttcgggaaattgatgtccaaagagcagcagttggaa
ggggagtaccggcaacttcactcacgcttgaggactcattcggaaagcatagcattctat
ggtggggaaaccagggaagaatctcatatacaacaaaagttcaagaaccttgttagccat
atgagtgtcgtgcttcatgatcactggtggtttggcatgatccaagatttcctgctgaag
tatcttggtgccacagtcgctgttattctgattatagaaccgttcttctccggtcatcta
agacctgatgactcgacactaggcagagccgagatgctaagcaatataagatatcacacc
agtgtcattatttctctctttcaggcgttgggaacgctttctataagttccaggcggctc
agccgactcagtggttatgctgaccgaatccatgagttgatggctgtctcgagagaactc
agtggcgatgataaagtgtctttccagaggaatagaagcagaaattacctaagtgaagct
aactatgttgagttttccggtgtcaaggttgtaactccaacgggaaatgttttggtggag
gatctaacccttcgagttgagcaagggtctaatcttctgattacaggtcctaatggaagt
ggcaagagttcccttttccgagtattaggaggcctatggcccctggtgtctgggcatatt
gtgaagccaggagttggttctgatcttaacaaggagatcttctacgtccctcagcggccc
tatatggcagtaggaacacttcgtgaccagttaatatatcctcttacttctgatcaagag
tctgtaccgctcactgaaacggggatggtggagctattgaaaaatgtcgacctagaatac
ttattggatcgataccaaccagacagagaggttaactggggtgacgaattatctcttgga
gagcaacagagattaggaatggccagactgttctatcacaaacccaaatttgcaattctt
gatgaatgcacaagtgctgtgacaactgacatggaagaacgttttgctgctaaggttcga
gctatgggaacttcttgcataacaatatcccatcgtccagcccttgttgcattccatgat
gttattctttcattagacggagaaggtggatggaacgtttactacaagagggacgactct
gtacttctgacggacgctggagatgattcagtgcaaatttcagatacaaatcggcaaaat
gatgcgatggttgttcaacgagcttttgctgccgctagaaaggaatctgcatcaaaggct
cagtcgtacttgacgcagttaatcgaaaagtcaccagttgttgataaaagtgttgtgttg
cctcgttttcctcaacctcgaacatccccaagggcgttgccattaagagtagctgcaatg
ttgaacacattgatacccactctatttgacaaacaaggagcacaacttcttttggttgct
tgccttgtcgtctcaagaacactgatctctgaccgaatagcatcgttgaatgggaccact
gttaaatatgtcttggagcaagataaggcagcctttgttcgtttgattggtttgagtgtt
ctccaaagtggtgcatcttctgtcattgctccttcattaaagcatctaacgcaaaggcta
gctctaggttggaggattcgcttgactcaacatctgctacggaattacttgagaaataat
gcgttttacaaggtcttccacatgtcaggcaatagtattgatgcggaccaaagactcact
cgtgacctggaaaaattaacccatgacttgtctggacttcttactggaatggtaaagcca
tcggttgacattctttggtttacctggaggatgaagctattgactggacagagaggagtt
gccatactttacacgtatatgttacttggtctgggttttctgagacgtgttgctccagat
tttggtgatctagctggtgaagaacagcaactcgaggggaagtttaggtttatgcacgag
aggctgaacacgcatgctgaatccattgcattctttggaggtggagctcgagaaaaagct
atggttgacacaaaattcagggcactactggaccactctctcatgctcctgaagaagaaa
tgggtgtatggcatacttgatgatttcgtgacaaagcagcttcccaataatgtgacttgg
ggattgagtttgttgtatgccctagaacacaagggagacagagcacttgtctccactcaa
ggtgaattggcacatgcattgcggtatctagcttccgttgtctctcaaagctttatggcg
tttggtgatattcttgaactacacaagaagttccttgagctctccggtggtattaacaga
atttttgagctggatgagtttttggatgcttctcagtcaggtgttacctcagataatcac
agaagccgtttggattctcaagatcgaatttccttttcagaggtggatatcattacccct
gctcagaaattgatggctagcaagttgtcatgcgaaatagtttcggggaaaagcctactc
gtcacaggtccaaacggtagtggaaagacttccgtatttagagtccttagagatatatgg
cccactgtatgtggaagacttttcaaaccatcattggatatcaaagagcttgggtcaggg
aatggcatattttttgtccctcagcgaccttatacatgtttagggacgctgagagatcag
attatataccctctatctaaagaagaagcagagaaaagggcagcaaagttgtacaccaat
gtaacaggagatagctcagctgaagctggaagcattctggacgttcatttgaaaaccatc
ctggagaatgttcggttagtttatctcttggaaagagatgaaagtggttgggatgctact
accaactgggaagacatactatctcttggagagcaacagaggctaggcatggcacgttta
ttctttcacagaccgaagtttggaatccttgatgaatgcaccaatgcaacgagtgttgat
gttgaggaacagctctacagggttgcaaaagacatgggagttactttcataacctcatcc
caacgtccggctttgatcccgttccactccttggagctaaggctgatcgatggagaagga
aactgggagctacgttctatcgagcagacaacagagtag
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integrated database retrieval system
