Raphanus sativus (radish): 130505226
Help
Entry
130505226 CDS
T06014
Name
(RefSeq) ABC transporter D family member 1-like isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
rsz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130505226
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130505226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
130505226
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
130505226
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
130505226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_29
AAA_21
AAA_23
SMC_N
nSTAND1
AAA_16
Motif
Other DBs
NCBI-GeneID:
130505226
NCBI-ProteinID:
XP_056855812
UniProt:
A0A9W3CW34
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MPSLQLLQLTERGRSLVASRRKSILLAAGIVAAGGAFYLKSRISSPRLDSSRGRSGGDGE
ALEKRRGNNKNAKKATPKKKGGGLKSLQVLTAILLSQMGKMGARDLLALLATVVFRTALS
NRLAKVQGFLFRAAFLRRAPLFLRLISENIFLCFMLSTTHATSKYITGALSLRFRKILTK
LIHSHYFENMVYYKISHVDGRITHPEQRIASDVPRFSSELSELIQDDLTAVTDGILYAWR
LCSYASPKYIFWILAYVLGAGTAIRTFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSESIA
FYGGETREESHIQQKFKNLVTHMSDVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFSG
HLRPDDSTLGRAEMLSNIRYHTSVIISLFQALGTLSISSRRLSRLSGYADRIHELMAVSR
ELSGDDKTSLQRNRSRNYLTEASYVEFSGVKVVTPTGNVLVEDLTLRVEQGSNLLITGPN
GSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYMAVGTLRDQLIYPLTSD
QETVPLTETGMVELLENVDLEYLLDRYRPDKEVNWGDELSLGEQQRLGMARLFYHKPKFA
ILDECTSAVTTDMEERFAAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYKRD
DSAPLTDAGVDSAKISENDRQNDAMVVQRAFAAARKESATTNSKAQAYLTQSIAKSPVVD
KSVVLPRFPQPRTSPRALPLRVAAMLNTLIPTLFDKQGGQLLLVACLVVSRTLISDRIAS
LNGTTVKYVLEQDKAAFVRLIGLSVIQSSASAVIAPSLKHLTQRLALGWRIRLTQHLLRN
YLRNNAFYKVFHMSGNTIDADQRLTRDLEKLTTDLSGLLTGMVKPSVDILWFTWRMKLLT
GQRGVAILYTYMLLGLGFLRRFAPDFGDLAGEEQQLEGKFRFMHERLNTHAESIAFFGGG
AREKAMVDTKFRALLDHSLMLLKKKWVYGILDDFVTKQLPNNVTWGLSLLYALEHKGDRA
LVSTQGELAHALRYLASVVSQSFMAFGDILELHKKFLELSGGINRIFELDEFLDASQSGV
TSENHTSRLDSQDRISFSEVDIITPAQKLMASQLSCEIVAGKACSSQDQMVVERLQYLEC
LEIYGQLYVEDLPNHHWISKNLGQGMAYFLCRSDHIHA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctccagctattgcagttaactgagcggggtcggagtctcgttgcttcaaga
cggaaatctatactgcttgcggctgggatcgtagctgctggtggagctttttacttaaaa
tcaaggatcagctcccctaggcttgattcttcccgtgggcggagtggtggtgatggtgaa
gcattggaaaagcggagaggaaacaataagaatgcaaagaaagccacaccaaagaagaaa
ggaggaggattgaagtctcttcaggttctcactgctatcctcttgtctcagatgggaaaa
atgggcgccagggatcttctcgcactactcgccactgtggttttcagaactgctttgagc
aatagattggcgaaagttcaaggtttcctattccgtgccgctttcttaaggcgtgcccca
ctgtttctacgtcttatctccgagaatattttcttgtgtttcatgctatcgactacgcac
gctacgtcaaagtacataactggggccttgagtttgcgtttcagaaagatattgacgaaa
cttatccattcacattactttgagaatatggtatactataaaatatcacatgtggatggt
cggattacgcacccggagcagcgaattgccagcgatgtaccaagattctcctcagagttg
agcgagcttatacaggatgatttgacagcagttactgatgggattttgtatgcatggcgc
ctttgttcatatgctagtccaaaatacatcttctggatactggcatatgtactgggagcc
ggtactgcgataaggaccttttctccttcttttggcaaattgatgtccaaagagcagcag
ttggaaggggagtaccgacaacttcattcacgcttaaggactcactcggaaagcatagca
ttctatggtggggaaaccagggaagaatctcatatacaacaaaagttcaagaatcttgtt
actcatatgagtgacgtccttcatgatcactggtggtttggcatgatccaagattttctg
ctgaagtatcttggtgccacagttgctgttattctgatcatcgagccattcttctctggg
catctaagacctgatgactcgaccttagggagagcagagatgctaagcaatataagatat
cacaccagtgtcattatttctctctttcaggcgttaggaacactttctataagttccagg
cggctcagccgactcagtggttatgctgaccgaatccatgagttgatggctgtctcgaga
gaactcagtggtgatgataaaacatctttacagagaaatagaagcagaaattaccttact
gaggctagctatgttgagttttcgggtgtcaaggttgttactccaacgggaaatgttttg
gtggaggatctcacccttcgagttgagcaaggatctaatcttcttattacaggtcctaat
ggaagtggcaagagttcccttttccgagtactaggaggtctatggcccctggtgtctggc
cacattgtgaagcctggagttggttctgatcttaacaaagagatcttctacgtgccccaa
cggccctatatggcagttggaacacttcgtgaccagttaatatatcctcttacgtctgat
caagagactgtaccgctcactgagactggaatggtggagctattggaaaatgttgaccta
gaatatttattggatcgctaccgacctgacaaggaggttaattggggtgatgaattatct
cttggagagcaacagagattgggaatggccagactgttctaccacaaacctaaatttgca
attcttgatgagtgcacgagtgctgtgacaactgatatggaagaacgttttgctgctaag
gttcgagctatgggaacttcttgcataacaatctcccatcgtccagcccttgttgcattc
catgacgttgttctgtcattagatggagaagggggatggagtgttcactacaagagggac
gactctgcacctctgacggacgctggagttgattcagcgaaaatttcagagaacgatcgt
caaaatgatgcgatggttgttcaacgagcgtttgctgcagctagaaaggaatctgccact
actaattcaaaggctcaggcgtacttgacacagtcaattgcaaaatcaccagttgttgat
aaaagtgttgtgttgcctcgttttcctcaacctcgaacatcgccaagggcgttgccatta
agagtagctgcaatgttaaacacattgatacccactctatttgacaaacaaggaggacaa
ctgcttttggttgcttgccttgtcgtctcaagaacattaatctctgaccgaatagcctct
ttgaatgggaccactgtgaagtatgtcttggagcaagataaagccgcatttgttcgtttg
attggtttgagtgttatccaaagtagtgcatctgctgtcattgctccttcattaaagcat
ctaacgcagaggctagctttagggtggaggattcgtttgactcaacatctgctacggaat
tacttgagaaataatgcgttttacaaggttttccacatgtcaggcaatactattgacgca
gaccagagactcactcgtgacctggaaaagttaaccactgacttgtctggacttcttact
ggaatggttaagccatcggttgatattctgtggttcacctggaggatgaagctattgact
ggtcaaaggggagttgccatactttacacatatatgttacttggtctgggtttcctgaga
cgttttgctcccgattttggtgatctagccggtgaagaacagcagcttgaggggaaattt
aggtttatgcacgagagactgaacactcatgctgaatccattgccttctttggaggcgga
gctcgagaaaaagctatggttgacacaaaattcagggcactactggaccactctctcatg
ctcttgaagaagaaatgggtgtatggcatacttgatgatttcgtgactaagcaacttccc
aataatgtgacttggggattgagtttgttgtatgccctagaacacaagggagatagagca
cttgtctccactcaaggtgaattggcacatgcattgcggtatctagcttctgtcgtgtct
caaagctttatggcgtttggtgatattcttgaactacacaagaagttccttgagctctct
ggtggtattaacagaatttttgagctcgatgagtttttggatgcttctcagtcaggtgtt
acctcagaaaatcacacaagccgcttggattctcaagatcgaatatccttttcagaggtg
gatatcattacccctgcgcagaagttaatggctagccagttgtcatgcgaaatagttgca
gggaaagcctgctcgtcacaggaccaaatggtagtggaaagacttcagtatttagagtgc
ttagagatatatggccaactgtatgtggaagacttgccaaaccatcattggatatcaaag
aacttgggtcagggaatggcatattttttgtgccgcagcgaccatatacatgcttag
DBGET
integrated database retrieval system