Raphanus sativus (radish): 130509412
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Entry
130509412 CDS
T06014
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03008
Ribosome biogenesis in eukaryotes
rsz03013
Nucleocytoplasmic transport
rsz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130509412
03008 Ribosome biogenesis in eukaryotes
130509412
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130509412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130509412
03009 Ribosome biogenesis [BR:
rsz03009
]
130509412
03016 Transfer RNA biogenesis [BR:
rsz03016
]
130509412
03036 Chromosome and associated proteins [BR:
rsz03036
]
130509412
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130509412
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
130509412
Pre-60S particles
130509412
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130509412
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130509412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Mesothelin
DUF3385
FlbD
Motif
Other DBs
NCBI-GeneID:
130509412
NCBI-ProteinID:
XP_056861312
UniProt:
A0A9W3DBY2
LinkDB
All DBs
Position
3:25018075..25026188
Genome browser
AA seq
1065 aa
AA seq
DB search
MAAEKLRDLSQPIDVAVLDATVAAFFVTGSKEERAAADQILRDLQANPEMWLQVVHILQN
TKSMDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRSERLYVNK
LNVILVQIVKHDWPAKWTSFIPDLVAAAKTSETICENCMIILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASQRQDLIRSTLSALHAYLSWIPLGYIFESPLLET
LLKFFPIPAYRNLTLQCLTEVAALNFGDFYNVQYVKMYTIFIGQLQTILSPGTTIPEAYS
NGSGEEQAFIQNLALFFTSFFKFHIRVLESAPDTVALLLTGLEYLINISYVDDTEVFKVC
LDYWNTLVLELFDAHHNSDNPAASVNLMRLQMPQVLQRRQLYSNPMSKLRGLMISRMAKP
EEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLNKQLSGE
EWAWNNLNTLCWAIGSISGSMAEDQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYV
VGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGER
EPFVSELLSGLAATVQDLEPHQIHSFYESVGTMIHAESDPLKRDEYLQRLMELPNEKWAE
IIGQARHSVEFLKDPGVIRTVLNILQTNTSAATSLGTDFLSQISLIFLDMLNVYRMYSEL
VSTSITDGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQFVSPMMEYVLAD
YARNVPDARESEVLSLFATIINKYKATMLDDVPNIFEAVFQCTLEMITKNFEDYPEHRLK
FFSLLRAIATFCFPALIKLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQQS
AFSNQFFRSYFIQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGALTEPLWDTATV
PYPYPNNAAFVREYTIKLLSSSFPNMTAAEVTQFVNGLYESRNDPSEFKKNIRDFLVQSK
EFSAQDNKDLYAEEAAAQREQERQRMLSIPGLVAPNEIQDEMVDS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagctaagagacttgagccagccgattgacgtcgccgtgctcgacgcc
accgttgccgccttcttcgtcaccggatctaaggaagagagagcggctgccgatcagatt
ttgcgggatttgcaagcgaatcctgagatgtggcttcaagttgtacacattcttcagaac
acaaagagcatggataccaagttctttgcccttcaggttctagaaggtgttataaagtac
agatggaatgcactacctgttgaacaacgagatggaatgaaaaattacatctcggaggtc
attgtgcagctctccagtaatgaagcatctttcagatcggaaaggctctatgtcaacaag
ctcaatgttatcttggttcagatagtgaagcatgattggccggcaaagtggacaagtttc
attcccgatctagttgcggctgctaaaactagcgaaactatctgcgaaaattgcatgatc
attttgaaactcctaagcgaagaggtttttgatttctcaagaggagaaatgactcagcaa
aagattaaagagctgaaacaatctctaaacagcgagtttaaactcattcacgagttatgc
ctctatgtcctctcagcttcacaaagacaggatcttatacgttcaacactctctgctttg
catgcctatctttcatggattccgttgggctatatttttgagtctcctttgcttgagacc
ctccttaagttctttcctataccagcatataggaatctcacgcttcaatgtctgaccgag
gttgccgctctcaacttcggagacttttacaatgtccaatatgtgaagatgtacaccata
tttatagggcagctgcagaccattctttcaccgggcacaaccatccctgaggcatattca
aacggaagtggtgaagaacaagcatttatccagaacttggccctttttttcacttcgttt
ttcaagtttcatatacgagtcttggaatctgcgccagatactgtcgccttattacttacg
ggtctcgaatatctcatcaatatatcatatgtcgatgacactgaagtctttaaggtttgt
ttggactactggaacacgttggttttggagctgtttgatgcacatcataattctgataac
cctgcagcaagtgtaaacctgatgagattgcagatgcctcaagtcctgcaacggcgtcaa
ctttattctaacccaatgtccaaattaagagggttaatgatcagccgcatggcgaagcct
gaagaagtgcttattgttgaagatgaaaatgggaatatcgtccgtgaaactatgaaggac
aatgatgttcttgtccagtacaagataatgcgggagacattaatctatctctcacacctt
gatcatgatgatactgaaaagcagatgttgaggaagctaaacaaacaattaagcggggag
gaatgggcatggaacaatttgaatacactatgctgggctattgggtctatttctggatct
atggcagaagatcaggaaaatagatttttggtcatggtcattcgagatttgttaaattta
tgcgagattaccaaaggaaaagacaataaagctgtcattgctagcaacattatgtatgta
gttggtcagtatccaaggtttttaagggcccattggaagtttctgaagacagttgtgaat
aagctgtttgagtttatgcatgagacgcatcctggtgttcaggacatggcctgtgataca
tttttgaaaatagttcagaagtgcaaacgtaaatttgttattgttcaggttggagagagg
gaaccatttgtatctgaacttctatctggccttgcagcaactgttcaagatcttgagcct
catcaaattcactcattttatgaatctgttggtactatgatccatgcagaatcagatccg
ctgaagagagatgaatatctacagaggttgatggaactcccaaacgagaaatgggcagaa
atcataggacaggcacgccatagtgtagaatttctcaaggatccaggtgtgatacgtaca
gtgcttaatattctacagacgaacactagtgctgctacttcactaggaacggacttctta
tcccaaatttccttgatatttctggatatgctcaacgtatacagaatgtacagtgagctt
gtgtcaaccagcattactgatgggggcccatatgcgtccaagacatcttttgtaaaactc
ttaagatctgttaagagggagacccttaagctgatagaaaccttcttagacaaagccgaa
gaccaaccgcacatagggaaacaatttgtgtctccaatgatggaatatgtacttgctgac
tatgcgaggaatgtgcctgatgctagggaatcagaagttctttcacttttcgcaacgatc
ataaacaagtacaaggcaacaatgttagatgacgtaccaaacatatttgaagctgttttc
cagtgtacattggagatgataactaagaacttcgaagattatccggaacaccgcctcaag
tttttctcgttactccgtgctatagctacattttgtttccctgccttgataaagttgtca
agtcagcaactgaagctagttatggattcaattatctgggcatttagacatactgagaga
aatatcgctgaaactgggcttaatcttttgcttgagatgctaaagaactttcagcaatct
gcgtttagtaatcaattcttccggtcatacttcatacaaatcgagcaagaaatatttgct
gtgctgactgatacctttcacaagcctggctttaagctgcatgtgttggtactgcagcat
ttattttgcctggttgagagcggtgctttgacggaacctttgtgggacaccgcaaccgta
ccttacccgtatccgaacaacgctgcatttgttcgtgaatacaccattaagctattgagc
tcttcattccccaacatgactgcagcagaggtcacacaatttgtgaatggactctacgag
tcgagaaatgacccgtctgaattcaagaaaaacattcgggacttccttgtacagtccaag
gaattttctgctcaggataacaaagacctctacgctgaggaagcagctgcgcagagagag
caagagcgtcaaagaatgctttcgattcctgggcttgttgctcctaatgagattcaagac
gagatggtggactcctaa
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integrated database retrieval system
