Ramlibacter tataouinensis: Rta_12530
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Entry
Rta_12530 CDS
T01544
Symbol
hsdM
Name
(GenBank) Candidate type I site-specific restriction-modification system, M subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rta02048
]
Rta_12530 (hsdM)
Enzymes [BR:
rta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
Rta_12530 (hsdM)
Prokaryotic defense system [BR:
rta02048
]
Restriction and modification system (R-M system)
Type I R-M system
Rta_12530 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
MmeI_Mtase
Motif
Other DBs
NCBI-ProteinID:
AEG92338
UniProt:
F5Y2H5
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All DBs
Position
1290551..1291981
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AA seq
476 aa
AA seq
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MRQDAGINGDAQRIEQMVWLLFLKVFDALEEELELTRGDYKSPIPEHLRWRHWASDSEGI
TGDALLDFVNNTLFPKLKSLPADPVRNPRGWVVRGVFEDANNFMKSGQLLRQVINKLGAI
DFNRQAERHQFNDLYEKILRDLQGAGNAGEFYTPRAVTQFMVDMVNPQLGEKVLDPATGT
GGFLVCAIEHLRKQVKNTEQEALLQSSILGVEKKQLPHLLCVTNLLLHGIEVPSNVRHDN
TLARPLRDYTPAERVDVVLTNPPFGGIEEPGIEAGFPADVRTKETADLFLVLIKHILKAN
GRAALVLPDGTLFGEGVKTRIKEQLLAECNLHTIVRLPNGVFAPYTGIKKNLLFFTKGRP
TEAIWYYEHPYPAGAKSYNKTKPIRIEEFDAEKAWWGSEADGFAARVESERAWKVDIAAI
KAAGYNLDQTNPHTPDAVSHDPDELLRDYARLQAESQTLRNQLKAILAESLSGARA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaggacgccggcatcaacggcgacgcgcagcgcatagagcagatggtctggctg
ctgttcctgaaagtctttgacgcgctggaagaagagctggagctgacccgcggcgactac
aagagccccattcccgagcacctgcgctggcgccattgggcttcagactccgaaggcatc
accggcgacgcgctgctggacttcgtcaacaacacgctcttccccaagctcaagtccctg
ccggccgacccggtgcgcaacccgcgcggatgggtggtccggggcgtgttcgaagatgcc
aacaacttcatgaaaagcggccagctgctgcggcaggtgatcaacaagctgggcgccatc
gacttcaaccgccaggccgagcgccaccagttcaacgacctgtacgagaagatcctgcgc
gacctgcaaggcgccggcaacgcgggcgagttctacacaccgcgcgccgtcacgcagttc
atggtggacatggtgaacccacagctgggcgagaaggtgctggacccggccaccggcacc
ggcggcttcctggtctgcgcgatcgaacacctgcgcaagcaagtgaagaacactgagcaa
gaggcgctgctgcaaagcagcatcctgggcgtggagaagaagcagctgccgcacctgctg
tgtgtgaccaacctgctgctgcacggcatcgaggtgcccagcaacgtgcgccacgacaat
accctggcccgcccgctgcgcgactacacgccggccgagcgcgtggacgtggtgctgacc
aacccgccctttggcggcatcgaagagccgggcatcgaggccggcttcccggccgacgtg
cgcaccaaggagacggcagacctgtttctggtgctcatcaagcacatcctgaaggcgaac
ggccgcgccgcgctggtgctgcccgacggcacgctatttggcgaaggtgtgaagacgcgc
atcaaagagcagctgctggctgagtgcaacctgcacaccatcgtgcgcctgcccaacggc
gtgtttgccccctacaccggcatcaaaaaaaatctgctgttcttcaccaagggccggccg
accgaggccatctggtactacgagcacccctacccggcgggcgccaagagctacaacaag
accaagccgatccgcatcgaagagttcgacgcagagaaggcctggtggggcagcgaggcc
gacggctttgcggcgcgagtggagagcgagcgtgcttggaaggtggacatcgctgccatc
aaggcagcgggctacaacctggaccagacgaacccgcacacgccggacgcggtgagccac
gaccccgatgaactgttgcgcgactacgcgcggctgcaggccgaatcgcaaacgctgcgc
aaccagctgaaggcgatcctggcggagtcgctgtcgggggcgcgggcgtga
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