Ramlibacter tataouinensis: Rta_24770
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Entry
Rta_24770 CDS
T01544
Name
(GenBank) Candidate protocatechuate 4,5-dioxygenase alpha chain
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00362
Benzoate degradation
rta00624
Polycyclic aromatic hydrocarbon degradation
rta00627
Aminobenzoate degradation
rta01100
Metabolic pathways
rta01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rta_24770
00627 Aminobenzoate degradation
Rta_24770
00624 Polycyclic aromatic hydrocarbon degradation
Rta_24770
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rta_24770
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Gene cluster
GFIT
Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
AEG93575
UniProt:
F5Y1Z1
LinkDB
All DBs
Position
complement(2630113..2630487)
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AA seq
124 aa
AA seq
DB search
MPLDKPYLDVPGTTIFDADQSRKGYWLNQFCMSLMKPENRERFKKDERAYLDEWAMTEEQ
KQAVLARDLNRCIQLGGNIYFLAKIGATDGKSFQQMAGSMTGMSEEEYRNMMIGGGRDPR
WGRS
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
gtgccactcgacaagccgtacctggacgtgccagggaccaccatcttcgatgccgaccag
agccgcaagggctactggctcaaccagttctgcatgtccctgatgaagccggagaaccgc
gagcgcttcaagaaggacgagcgcgcctacctcgacgagtgggccatgaccgaggagcag
aagcaggcggtgctggcgcgcgacctgaaccgctgcatccagctggggggcaacatctac
ttcctggccaagatcggcgccaccgacggcaagagcttccagcagatggccggcagcatg
accggcatgagcgaagaggagtaccgcaacatgatgatcggcggcggccgcgacccgcgc
tggggcaggagctga
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