Ramlibacter tataouinensis: Rta_28060
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Entry
Rta_28060 CDS
T01544
Name
(GenBank) Candidate malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00020
Citrate cycle (TCA cycle)
rta00270
Cysteine and methionine metabolism
rta00620
Pyruvate metabolism
rta00630
Glyoxylate and dicarboxylate metabolism
rta00680
Methane metabolism
rta01100
Metabolic pathways
rta01110
Biosynthesis of secondary metabolites
rta01120
Microbial metabolism in diverse environments
rta01200
Carbon metabolism
Module
rta_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rta_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rta_M00012
Glyoxylate cycle
rta_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rta_28060
00620 Pyruvate metabolism
Rta_28060
00630 Glyoxylate and dicarboxylate metabolism
Rta_28060
09102 Energy metabolism
00680 Methane metabolism
Rta_28060
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Rta_28060
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Rta_28060
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AEG93909
UniProt:
F5Y569
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All DBs
Position
complement(2990306..2991292)
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AA seq
328 aa
AA seq
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MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPAEGPQKALKGVMMEL
EDCAFPLLAGMEAHGDPMTAFKDTDYALLVGSMPRKQGMERAELLSINGKIFIGQGKALD
AVASRNVKVLVVGNPANTNAYIAMKSAPSLPRENFTAMLRLDHNRALSQVAAKTGTKVGE
IEKLTVWGNHSPTMYADYRFATVNGKSVKDMINDQEWNANVFLPTVGKRGAAIIEARGLS
SAASAANAAIDHMRDWVLGSSGKWVTMGVPSNGEYGIPKDVMFGFPVTTQGGKYEIVKGL
EIDAFSQERINKTLKELQDEQAGVAHLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagcccgtccgcgtggccgtcaccggcgccgccggccagatcggttatgcc
ctgctgtttcgcatcgcctcgggcgagatgctgggcaaggaccagccggtgatcctgcag
ctgctggaagtgccggcggaaggtccccagaaggcgctcaagggcgtgatgatggagctg
gaggactgcgccttcccgctgctggccggcatggaggcccacggcgacccgatgacggcc
ttcaaggacaccgactatgcgctgctggtgggctcgatgcctcgcaagcagggcatggag
cgggccgaactgctgtccatcaacgggaagatcttcatcggccaaggcaaggcgctggac
gccgtcgccagccgcaacgtcaaggtgctggtggtgggcaacccggccaacaccaacgcc
tacatcgcgatgaagagcgcgccctcgctgccgcgcgagaacttcaccgccatgctgcgc
ctggaccacaaccgcgccctgagccaggtggcggccaagaccggcaccaaggtcggcgag
atcgagaagctcaccgtgtggggcaaccactcgcccaccatgtacgccgactaccgcttc
gccaccgtgaacggcaagagcgtcaaggacatgatcaacgaccaggagtggaacgccaac
gtgttcctgcccaccgtgggcaagcgcggcgccgccatcatcgaggcgcgcggcctgtcc
tcggcggcctcggccgccaacgccgccatcgaccacatgcgcgactgggtgctgggcagc
agcggcaagtgggtgaccatgggcgtgccctccaacggcgagtacggcatccccaaggac
gtcatgttcggcttcccggtcaccacccagggcggcaagtacgagatcgtcaagggcctg
gagatcgacgccttcagccaggagcggatcaacaagacgctcaaggaactgcaggacgag
caggcgggcgtcgcgcacctgctgtga
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