Rathayibacter toxicus WAC3373: APU90_08775
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Entry
APU90_08775 CDS
T04269
Name
(GenBank) UDP pyrophosphate synthase
KO
K12503
short-chain Z-isoprenyl diphosphate synthase [EC:
2.5.1.68
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00900
Terpenoid backbone biosynthesis
rtc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
APU90_08775
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rtc01006
]
APU90_08775
Enzymes [BR:
rtc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.68 (2Z,6E)-farnesyl diphosphate synthase
APU90_08775
Prenyltransferases [BR:
rtc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
APU90_08775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-ProteinID:
ALS57851
UniProt:
A0A0C5BAQ7
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All DBs
Position
1919229..1920020
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AA seq
263 aa
AA seq
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MSVVKLRLLGGADLLYGVYKRCLRSSLTPEVVPQHVAMIIDGNRRWARQRSFENAAHGHR
AGAAKVHEFLQWCDQLGVKHVTLYLLSQDNLVGRGSSELAELIAIIADLAEEVSRQPFWR
VQHVGSDEGLPGSLVTALDSAEERTSSHTGLHVNLAVGYGGRHEIAQAVRSILDEHGKRG
SSIDDVAELLTPELIGEHLYTSGQPDPDLVIRTSGEQRLSDFLLWQSAYSEFYFMEALGP
DIREVDFLRALRDYAGRHRRFGS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgaaactgagactgctcgggggagcggatctgctgtacggcgtctataaa
aggtgtctgcgctcgagcctgacgccagaggtcgtacctcagcacgtcgcgatgatcatc
gacggtaaccggcgctgggctcgccagcgatctttcgagaacgcggctcacggccatcgt
gcgggtgccgccaaggtgcatgagtttctccagtggtgcgaccagctcggcgtgaagcat
gtcaccctgtatctgctgtcgcaggacaatctggttggccgcggcagttccgagctggcg
gagctgatcgcgatcatcgctgatctcgccgaggaggtgtctcggcaacctttctggcga
gtacagcacgtcggttccgatgaggggctgccgggctcgctagtgaccgccctggactcg
gcggaagagcgcacatcgtcccatacggggttgcacgtcaacctcgccgtcggctacggc
ggacgacacgagattgcgcaggctgtgcggagcatcctggatgagcacggcaagcgcggc
tcctcgattgacgatgtcgccgagttactcacccccgagcttatcggggagcacctctac
accagcggccagcccgaccccgatctggtcatccgtacgtcgggtgagcagcgtttgtcg
gattttttgctttggcagagtgcgtatagcgagttctactttatggaggcgctggggccc
gatattcgcgaggttgacttcctgcgagcgctgcgcgattacgccggtcgtcaccgtcgc
ttcggtagctga
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