Rissa tridactyla (black-legged kittiwake): 128905389
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Entry
128905389 CDS
T09443
Symbol
GLB1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00052
Galactose metabolism
rtd00511
Other glycan degradation
rtd00531
Glycosaminoglycan degradation
rtd00600
Sphingolipid metabolism
rtd00604
Glycosphingolipid biosynthesis - ganglio series
rtd01100
Metabolic pathways
rtd04142
Lysosome
Module
rtd_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
128905389 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
128905389 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
128905389 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
128905389 (GLB1)
00511 Other glycan degradation
128905389 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128905389 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128905389 (GLB1)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
128905389 (GLB1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128905389 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
128905389
NCBI-ProteinID:
XP_054047407
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All DBs
Position
2:117979315..118027580
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AA seq
652 aa
AA seq
DB search
MVRLLFPLAALSALLRAASIPQRSFGIDYDCGCFVKDGEPFRYISGSIHYSRVPRYYWKD
RLLKMKMAGLDAIQTYVPWNYHEPQLGVYDFSGDKDLEYFLQLANDTGLLVILRAGPYIC
AEWDMGGLPAWLLEKKSIVLRSSDSDYLAAVEKWMGVLLPKMRPHLYHNGGPVIMVQVEN
EYGSYFACDYDYLRSLLKLFRQHLGDEVVLFTTDGASQLYLRCGALQGLYATVDFAPGGN
VTAAFLAQRSSEPTGPLVNSEFYTGWLDHWGHRHSVVPAQTVAKTLNEILARGANVNLYM
FIGGTNFAYWNGANMPYMPQPTSYDYDAPLSEAGDLTEKYFALREVIGMYKQLPEGLIPP
TTPKFAYGKVRLQKVGTVVEVLDTLSHEGPVKSTYPLTFVQLKQYFGFVLYRTTLPKNCT
EPTQLSSISNGVHDRAYVSVDGVPQGVLERGKSLTINITGKAGANLDILVENMGRVNFGR
YNNDFKGLVSNLTLDEDILVEWEMYPLDIDGAVNRDINGHVDLPKRSVGNPLSYEAPTFY
TGRLSIPGGIPDWPQDTYVKFPGWTKGQIWINGFNLGRYWPARGPQLTLFVPRNILVSSV
PNNITVLELECSPCSTRACEIEFVDKPSINATTQYENDAPQLFVRDTWLNHL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggctcctgttcccgctggccgccttgtcggcgcttctccgggcagcgagtata
ccccagaggagttttgggattgattatgactgtggctgctttgtcaaggatggggaacct
ttccgttacatctcaggtagcattcactactcacgagtgccccggtattactggaaagac
cgcttgttgaagatgaaaatggcaggacttgatgccattcaaacgtatgtgccatggaac
taccacgaaccccagctgggcgtgtatgatttttctggtgacaaagatctagagtatttc
ttgcagcttgctaacgacactggtttgctggttatcctgcgagctggaccttacatctgt
gcagaatgggacatgggaggtcttcctgcatggctgttggagaagaaatctattgttctc
agatcttctgattcagattacctggcagcagtagagaaatggatgggtgtccttttgcca
aagatgcggcctcacctctatcacaatggaggtccagtcatcatggtgcaggtagagaat
gagtatggaagctactttgcttgcgactatgactatctgcgttcccttctgaagctcttt
cgccagcatcttggggatgaggtagtgctgttcacaactgatggtgcaagccagttatac
ttgagatgtggagctcttcagggtctttacgcaacagtggactttgctccaggtggcaat
gtcacagcagcattcttagctcaaaggagcagtgagcctacaggccctttggttaattct
gagttttatactggatggttggatcactgggggcaccgtcattctgttgtgcccgcacaa
actgtagctaaaacacttaatgaaatcctggcacgtggtgctaacgttaacctgtacatg
tttataggtgggactaactttgcctattggaatggtgctaatatgccctatatgccacag
cccactagttatgactatgatgctccactgagtgaagcgggggatctcacagaaaaatat
tttgccttgagggaagtcattggtatgtataagcagttaccagaaggtcttatccctccg
acaacacctaaatttgcatatgggaaggttcgcttgcagaaggtgggcactgtggtggag
gttcttgacacgctgtcacatgagggaccagtgaaaagcacttacccattaacctttgtt
cagctaaagcagtattttgggtttgtactgtacagaactacgcttccaaaaaactgtacg
gagccaacacaactgtcttcaatttcaaatggagtccatgatcgtgcctatgtctctgtt
gatggggttcctcaaggtgtccttgaaaggggcaaatcacttacaataaatataactggg
aaggctggagcaaatctggacatcttggtagagaacatgggccgagtcaactttggcaga
tacaataatgactttaaaggtctagtttcaaatttaactcttgatgaagacatacttgtt
gaatgggaaatgtatcctctagacatagatggagcagtgaaccgtgacattaatggccat
gttgacctaccaaagagatctgttggcaatccactgagttatgaagcacctactttttac
actggtagactgtcaattcctggagggattccagactggcctcaggacacctatgtcaag
ttccctggctggacaaagggacaaatttggatcaatggctttaatcttggtcgctactgg
ccggcccgtggtcctcagctgacccttttcgttcccaggaatatacttgtttcatcggtg
ccaaacaacataacagtgttggagctggagtgttctccttgcagcacccgagcatgcgag
atagaatttgtagacaaacctagtatcaatgcaacaacacagtatgaaaatgatgccccc
caactctttgttagagacacgtggctgaaccatctataa
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