Rissa tridactyla (black-legged kittiwake): 128906716
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Entry
128906716 CDS
T09443
Symbol
SMYD2
Name
(RefSeq) N-lysine methyltransferase SMYD2
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00310
Lysine degradation
rtd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128906716 (SMYD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128906716 (SMYD2)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128906716 (SMYD2)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
128906716 (SMYD2)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128906716 (SMYD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
128906716
NCBI-ProteinID:
XP_054050468
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Position
3:complement(24530023..24560063)
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AA seq
436 aa
AA seq
DB search
MRSEAAPQPSGLERFASAGKGRGLRARRRYAVGELLFSCPAYTAVLTVSERGSHCDGCFA
RKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSAMCAFGQNWNPSETVRLTARILAKQK
THPERTESEKLLAVKEFESHLDKLDNEKRELIQNDIAALHHFYSKHLEYPDNAALVVLFA
QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVKEIEPGEEVF
TSYIDLLYPTEDRNDRLRDSYFFNCDCRECTTKEKDKEKLEIRKLNDPPPAETVRDMIKY
ARNVIEEFRRAKHYKSPSELLEICELSLDKMGAVFEESNVYMLHMMYQAMGVCLYVQDWE
GALRYGQKIIRPYSKHYPSYSLNVASMWLKLGRLYMALENRPAGVKALKRAIAIMEVAHG
KDHPYISEIKKELEDH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaggcggcgccgcagccgagcggcctggagaggttcgccagcgccggcaag
ggccgggggctgcgggcgcggcggcgctacgccgtgggggagctgctcttcagctgcccg
gcctacacggccgtgctgaccgtcagcgagcgcggcagccactgcgacggctgctttgcc
aggaaagaaggattgtccaagtgtggaagatgtaaacaggccttttactgcaatgtggaa
tgtcagaaggaagactggccaatgcacaaactagagtgttctgccatgtgcgcttttggg
cagaactggaatccctcagagaccgtgaggctgacggcgaggatccttgccaaacagaaa
actcaccctgaaagaacagagtcggagaagttgcttgctgtaaaagagtttgaatcacac
cttgacaaactagacaatgaaaagagagagctgattcagaacgacattgctgctcttcat
cacttttactcaaagcacttggagtaccctgacaatgctgcccttgtagttctctttgca
caagttaactgtaatggcttcacaattgaagatgaagaactttctcatttgggatcagcc
atatttcctgatgttgcattgatgaaccatagctgttgcccaaatgtgattgtaacatac
aaggggaccttggctgaagtcagagctgttaaagagattgagcctggagaagaggttttt
accagctatattgacctgttgtatcccacagaagacagaaatgaccggttaagagactcg
tatttctttaattgtgattgcagggagtgcacaaccaaagaaaaggataaagagaaactg
gaaatccgcaagctgaatgatcctccaccagcagagacagtgcgggacatgatcaaatat
gccaggaacgtgattgaggaattcaggcgagccaaacactacaaatcccctagtgaatta
ctggagatctgtgaactcagcctggacaagatgggtgcagtgtttgaggagagtaatgtt
tatatgttacatatgatgtaccaggccatgggcgtctgtctctacgtgcaggactgggaa
ggtgcactgcgttatgggcaaaaaattatcaggccatacagtaaacattatccttcctac
tcgctgaacgtggcctccatgtggctgaaattagggagactgtatatggcgctggagaac
agaccagctggagttaaagccctgaagagggcaattgctatcatggaagtagcacacggg
aaagatcatccatacatttcagagatcaaaaaggaattagaggaccactga
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