Rissa tridactyla (black-legged kittiwake): 128909828
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Entry
128909828 CDS
T09443
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128909828 (LCMT2)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
128909828 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
128909828 (LCMT2)
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128909828 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_4
Kelch_2
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
128909828
NCBI-ProteinID:
XP_054058086
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Position
1:12330056..12351724
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AA seq
683 aa
AA seq
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MGRGRPGGPHPAAVQGTGGSSAVSKCSAAARGYIQDRFLRLLVGRRRRRAPLVHRGYYIR
ARAVGHCVQDFLLKTQSRPRTQIVSLGAGFDSLYFRLKDIGLLHHTVVYEVDFPNVACQK
ATLIKRTKELSALVGDTGGEGLGVTTFSGEDYKLLGVDLSELSELERALEEAGLDNEIPT
LFIAEVVLTYMENSRSDALIQWAAEHFSQACFLLYEQMHPEDPFGRVMQQHFSQMNSALN
SLARYPDGEAQQMRFFEKGWTECNVMDMNEFFTCCIPEDEQQRMQALEPFDEYEEWHLKC
SHYFVLTASKGMEPSWTPLLSNMTVPHRDGPIRTAGSITAAACPMHSEVSGLRRYGHHSV
LLKPNVILTTGGFGEEDGHHCRMRNFHVLIKHAGCWKAGYVKKENPDKRWDGRLYHTVSC
LSDSLALVVGGRTSPSSAGLGMLWLKFPETWNASEPDDITVELVSLQPAAEPAALRWRHS
TTEVIFKGEKYLFLYGGRSAIEPVLGDWCFLHTQELSCVVIPVEGPVPESRHSHSACSWK
GGVLIAGGLGAAEQPLGSVFFLRELERGFQWQTVETHPPLSPRYSHTAHVHDGKLLLVGG
VWIHSSSVPGVTVIDLITGLCLDYTINVEHLEWPLMLHNHSSVFLPNEKELLLIGGGGNC
FSFGTHLNPEPVLLSLSNILASH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgggcggccgggcggcccgcaccccgccgccgtccagggcaccggcggcagc
agcgccgttagcaagtgctcggcggcggcgcggggctacatccaggaccggttcctgcgg
ctcctggtggggcggcggcggcggcgagcccccctcgtccaccggggttattacatccgt
gcccgtgctgtaggtcactgtgttcaagacttcctgctgaagacccaaagccgccctagg
acacagatcgtgtccttaggtgctggctttgattccttatacttccgtttgaaggacata
ggtcttctgcatcacactgtggtatatgaggtggatttcccaaatgtggcgtgccaaaaa
gctactctgatcaaaagaacgaaagagttgtcagcactggtgggagataccggaggggaa
ggattaggggtcactaccttttctggagaggattataaattattgggagtggatttatca
gagctatctgagctggagagagccctggaggaagcaggactggacaatgaaatccccacc
ctcttcatagcagaggtggtgctcacctacatggaaaatagcaggtcagatgccttgatt
cagtgggcagcggagcatttctctcaggcatgctttctgctgtatgagcagatgcaccca
gaggacccctttggacgtgtcatgcagcagcattttagccagatgaactctgcacttaat
tctttggcacggtaccccgatggcgaggcacagcagatgcgcttttttgaaaagggctgg
actgaatgcaatgtcatggatatgaatgagtttttcacctgctgtattccagaagatgag
cagcaaagaatgcaggctctggagccttttgatgaatatgaggaatggcatctgaaatgt
tctcattactttgtcttgactgcatcaaaggggatggaaccttcctggactccattgtta
tccaatatgacagttcctcatcgtgatggtcccatcaggacggctgggagtatcactgcg
gcagcgtgtccaatgcactctgaagtttctggcctgagacgttatggtcaccactctgtt
cttctaaaacccaatgtgattctcaccactggaggctttggggaggaggatggacatcac
tgccgtatgagaaattttcatgtgctaattaagcatgcaggctgctggaaagctggctat
gtgaaaaaggaaaatcctgataaaagatgggatgggcggttgtaccatactgtgtcatgt
ctctcggacagtctggccctggtggtaggaggacgaacatccccgtcaagtgcaggcttg
ggaatgttgtggctaaagtttcctgaaacctggaatgcctcagagccagatgacattaca
gtggagcttgtgagtctgcagcctgctgctgaaccagctgctttgcgttggagacacagt
acaactgaagtaatattcaaaggtgagaagtacctgttcctgtatggtggccgctctgct
atagagcctgtgctaggggattggtgtttcctgcacactcaagaactttcctgcgttgtg
attcctgttgagggtccagtaccggaaagccgtcactctcacagtgcctgcagctggaaa
ggaggagtactaattgcaggaggtctgggagcagctgagcagcccttaggttcagttttc
tttctgagggagcttgagcgtggctttcagtggcagacggtagagacacatcctcctctg
agcccgaggtattcacatactgcacatgtgcatgacggaaaacttctgctcgttggtggg
gtgtggattcactcatcttctgtgccaggcgtcactgtcattgacttaataactggtctg
tgcttggactatacgattaatgtggagcatctggagtggccattaatgctacataatcac
agcagtgtctttctgccaaatgagaaggagctgttgcttattggtggtggtgggaactgc
ttctccttcggaacgcacctgaaccccgagcctgtcttgttgagcctcagcaatatcctg
gccagccactga
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