Rissa tridactyla (black-legged kittiwake): 128911052
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Entry
128911052 CDS
T09443
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03020
RNA polymerase
rtd04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128911052 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
128911052 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128911052 (POLR3A)
Enzymes [BR:
rtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128911052 (POLR3A)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
128911052 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2120
Motif
Other DBs
NCBI-GeneID:
128911052
NCBI-ProteinID:
XP_054061264
LinkDB
All DBs
Position
6:47035697..47074973
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCHIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPLVSTFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILRRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANIDFMRKLVRNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CRDSFLQALTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESSPPRRPLIFDNNEFHIPIVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacggatgtggccaagaagataagccacatctgtttt
ggcatgaaatctccagaagagatgcgccagcaagctcacattcaagtggttagcaaaaac
ttgtacagtcaggacaatcatcactctccgctgcagtatggagtacttgaccatcgtatg
ggaactagtgaaaaagaccgcccctgtgaaacctgtggaaaaaacctagctgattgttta
ggacattatgggtatattgacttagaactgccctgttttcatgttggatactttaaagct
gtgataggcatcttacagatgatctgtaaaacctgttgccatatcatgctctcagtggaa
gaaaaaaaacagtttttggattacctgaagcgacctggccttacatatcttcagaagaga
gggctaaaaaagaaagtgtctgaaaagtgccgaaagaaaaacacttgtccttactgtggt
gcctttaatggaactgtgaagaagtgtggcttgttgaaaataatacatgaaaagtacaag
accaataagaaagtggtagatccattagtatctacttttctccagtcctttgaaactgcc
atagaacacaacaaagaagtagaacccttgctgggaagagctcaggaaaacttaaatcct
ttggtagtattgaacctcttcaaaagaatcccagcggaagatatccctctgctgcttatg
aacccagaagcaggtaaaccctcagatttgatcctcaggcgactcttggtgcctccactg
tgtatcaggccctctgtggtgagtgacttgaagtctggcaccaacgaagatgacttaaca
atgaaactgacagagataattttcctcaatgatgtaataaaaaagcataggatatcagga
gctaaaacacagatgattatggaagactgggactttcttcaactgcagtgtgccctgtac
attaacagtgagctctcaggaattcctctcaacatggcacctaaaaaatggaccagaggt
tttgttcagagacttaagggaaagcaaggtcggtttagaggcaatctgtctggaaaacga
gtggatttctctggcagaacagtcatttctcctgaccctaacttaagaatagatgaagta
gcagtgcctattcatgttgctaaaatactaacttttcctgaaaaggtgaacaaagctaat
attgattttatgaggaaacttgttcgtaacggtcctgatgttcatcctggagccaacttc
atacagcaaaggcacacacagatgaaaaggtttttgaaatatggaaaccgagaaaaaatg
gcccaggaactgaagtttggtgatatcgtggagcgacatcttatagatggtgacatagtc
ctcttcaatcgacagccctctcttcataagctgagcatcatggctcacattgctagagtg
aaacctcataggacattcagatttaatgaatgtgtctgtacaccatacaatgcagacttt
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcgctt
gttttaatggggactaaagctaacttggtaacaccaagaaatggagaacctctcattgct
gctattcaggatttcctcacaggtgcctatcttcttacattaaaagataccttttttgat
cgagccaaagcctgtcaaattattgcttctatcctggttggcaaggatgagaagattaaa
gttcgtcttccacctccagcaattctgaagcctgtaacactctggacaggaaaacaggtt
ttcagcctgattctcaaacccagtgatgattgtcccgtaaaagccaatctacgaaccaag
ggcaaacagtattgtggcaaaggggaagacctgtgttacaatgactcttatgtcacaatt
caaaacagtgagttgatgagtggcagtatggacaaaggaaccttaggttcaggatccaag
aacaatatcttctacatcttactgagagactggggacaggtggaagctgcagatgccatg
tcacgactagccagacttgctcctgtctatctttctaatcgtggcttttcaattggaatt
ggtgatgtaacccctgggcagggcctgctaaaagctaagtatgagctcctgaatgctggc
tataagaagtgtgatgagtatattgaagctctgaacactggcaagctacagcagcagcct
ggttgtactgcagaagagacactagaggccttaatccttaaagaactgtctgttatcaga
gaccacgctggcagtgcttgtctcagagaactggacaagagcaacagtccccttatcatg
gctctctgtggttctaaaggctcctttattaatatatcccagatgattgcttgtgtaggt
cagcaggctatcagtgggtcccgagttcctgatggatttgagaacagatctttgcctcac
tttgagaaacattctaagctcccagcagcaaaaggctttgttgctaatagcttctattct
ggtttgactcccactgaatttttttttcatacaatggctggtcgagaaggtctggttgac
acagctgtaaagacagccgaaactggatatatgcagaggcggctggtaaagtcccttgaa
gatctttgctcacagtatgatttgacagtcagaagttctactggtgatattatacagttt
atttatggaggtgatggcttggatcctgcagccatggaagggaaggatgaaccactggaa
ttcaagcgagttctagacaacatcagagctgtatatccatgccgaagtgaaccagccctt
agtaaaaatgaattggtgttaacatctgagtccatcatgaagaagaatgaatttctttgc
tgccgagacagttttctgcaggcattaactgagacaggttatgaaaaatataatgaggaa
attaaaaaattcatcaagggtgtttctgagaagattaaaaaaactagggacaagtatggc
attaatgacaatggcacaacagagccacgagttttgtatcagttggataggattactcca
acacaactagagaagtttctagagacttgtagggacaagtacatgagggcacagatggag
cctggttctgcagtaggagctctttgtgcacagagtattggtgagcctggcacacagatg
actctgaagactttccattttgctggcgttgcttcaatgaacattactttgggtgtgcca
agaatcaaagaaatcattaatgcttcaaaggctattagtacccctattataacagcacag
ttggacaaagacgatgatcctgattttgcccgcctggttaaaggaagaattgagaaaact
ttattaggagagatttcagaatatattgaggaagtgtttcttccagacgattgtttcatc
ctagtgaagctgtctttagagcgcattagactactgagattagaggtgaatgcagagact
gtgcgctattctatttgcatatctaaactcagagtaaagcctggggatgttgctgtccat
ggagaagcagttgtatgtgtgacccctcgggaaaatagcaagagttcaatgtattatgta
ttgcagtccctgaaggaagagctaccaaaggttgtagtgcaaggtataccagaggtttcc
cgagctgtcattcatattgatgaacaaagtggaaaggaaaaatataaacttctagttgaa
ggtgataatctgcgagctgttatggctactcacggagtgaaaggaacaaaaacgtcctct
aacaacacttatgaggtagagaagacactaggaattgaagctgctcggacaaccattatc
aatgagattcagtatacaatggtgaaccatggtatgagcattgacaggagacatgttatg
ttgctgtctgacctaatgacttataagggtgaagtgctgggcattactaggtttggacta
gcaaaaatgaaggaaagtgtgttgatgctggcttcttttgaaaagactgcagaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtttctgagtgcatcatc
atgggaattccgatgaatattggaacaggactctttaaactgttgcacaaagcagacaaa
gaatcaagccctcctaggaggcctctgatatttgataataatgaatttcatattcccatt
gttacatag
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integrated database retrieval system
