Rissa tridactyla (black-legged kittiwake): 128912498
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Entry
128912498 CDS
T09443
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128912498
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128912498
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Chlamy_scaf
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
128912498
NCBI-ProteinID:
XP_054064474
LinkDB
All DBs
Position
7:complement(21207448..21276222)
Genome browser
AA seq
2014 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNSKQDRKDNDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTI
GENGTLVNSTVTPFDWKGYIEDESHFYFLEGQSDALLCGNSSDAGQCPEGYTCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPS
AGGEAGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKEEDEFHKSESEDSIRR
KGFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFA
DDEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVV
SLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRISSSFHVSMDFLEDPALRE
RAMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVD
LAITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEG
WNIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGE
WIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNN
LQIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVDLSK
DHDYIKDVNGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEE
FSSESDLEESKEKLNSSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRRFKCC
QVSIEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTML
EYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAI
KSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
FYYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFK
GWMDIMYAAIDSRDVLQQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK
FGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILIC
LNMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVV
ILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAP
ILNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVA
TEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAM
DLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKR
KQEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGAGLGLKDEILIDKLNENSFTEK
TDITASTAVCPPSYDHVTRPVKEKHEKEDKGGQK
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcactagagag
tctcttgcagctattgaacaacgcattgctgcagaaaaagctaagaattctaaacaagat
cgtaaagacaatgatgatgaaaatgggccaaagccaaacagtgatttggaggcaggaaaa
acacttccgtttatatacggcgacatacctccaggaatggtgtctgagcctttggaagac
atggacccatactacatcaataaaaaaacctttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacctctgccctgtacattttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctcccgactggacaaagaatgtagagtat
acgttcactggaatttacacatttgagtcactcataaaaatcattgcaagaggcttttgc
ttagaagattttacttttcttcgagatccatggaactggcttgatttcactgtcattacc
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcagtccgtgaagaagctctcggacgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagaaaattttactctggaaacaaatatcacttcccagctaaacagcaccata
ggtgaaaatggtacattggttaattcaacagtgactccatttgactggaaggggtacatt
gaagatgaaagtcatttttattttctggaagggcaaagcgatgctctgctttgcggaaat
agttctgatgctgggcagtgcccagaaggatatacatgtgtgaaagctggtagaaacccc
aattatggctacacaagttttgacaccttcagctgggctttcttgtcactatttcgcttg
atgactcaagacttctgggaaaatctttatcaattgacactgcgtgctgctgggaaaaca
tacatgatattttttgttctggtgatttttctgggctctttctacctgatcaacttgatc
ttggctgtggtcgccatggcctatgaagaacagaatcaagcaaccatggaagaggcagaa
cagaaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagct
caggcagcagcagtggcagcagcagcagtaacagcatccgcggagtcaagggagcccagc
gctgggggagaagcaggagggctctcagaaagttcctcagaggcatcaaaactgagctca
aagagtgcgaaagagaggagaaacagaaggaaaaaaagaaaacagaaagaacagtctgga
ggagaggaaaaagaagaagatgaatttcacaagtctgaatcagaagacagcatcagaagg
aaaggtttccgattatctattgaaggcaatagattgacatatgaaaagaagtattcttct
ccacatcagtctttgctgagcattcgaggctccctgttttctccacggcgtaacagcaga
acaagtcttttcagcttcagaggtagagcaaaggatataggatcagaaaatgactttgct
gatgatgagcacagcacttttgaagacaatgatagcagaagagattctctctttgtgccg
cgcagacatggtgaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatg
ctggcagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtt
tccttggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtg
ataatagataaaccagctactgatgacaatggcaccactacagaaacagaaatgaggaag
agaatatcaagctctttccatgtttcaatggacttccttgaagatcccgctttaagggaa
agagccatgagcatcgctagcatcctcacaaacactgtggaagaacttgaagaatcaaga
cagaaatgcccaccatgttggtataaatttgcaaatattttcttgatctgggactgcagc
ccacattggttaaaagtaaaacatatcgtcaacttagtggtaatggacccatttgttgac
ctggctattacaatttgcattgttttaaatacactctttatggctatggaacattatcca
atgactgatgaattcaataatgtactttcagttggaaatctggtcttcactggaattttc
acagcagaaatgtttctcaagataattgcaatggatccttactattatttccaggaaggc
tggaatatttttgatggttttattgtaacccttagcttggttgagcttggtcttgcagat
gtggaaggactgtcagttcttcgatcattcagattgttacgagttttcaaattggcaaaa
tcttggccaacactaaatatgctgattaagattattggcaactcagtgggggctttgggg
aacctgaccctggtgctggccatcattgtcttcattttcgctgtggttgggatgcagctg
tttgggaaaaactacaaggaatgtgtctgcaaaatcgcaagtgactgtgttcttccacgc
tggcacatgcaagatttttttcactcttttttgattgtatttcgagtgctgtgtggagaa
tggatagaaacgatgtgggactgcatggaggttgcaggccaagccatgtgccttacagtc
ttcatgatggtcatggtgattggaaacctagtggtactgaacctatttttggccttgctg
ttgagctcatttagtgcagacaaccttgccgttacagacgatgacaatgaaatgaataat
ctccaaattgctgtagcaagaatgcagaagggcatagactatgtgaaaagaaaagcacgt
gaattcatccaaaaagcttttgttaaaaaacaaaaagctttagatgaaatcaaaccactt
gaagatttgaacaacaaaaatagctgtatttctaaccatacaactgtggatctaagcaag
gaccatgactatattaaagatgtgaatggaacaactagtggcataggcacaggcagcagt
gtggaaaaatacataattgatgaaagtgattacatgtcattcataaacaacccaagtctc
actgtgaccgtgcccattgctgtgggtgaatccgactttgaaaatctaaacacagaggaa
tttagcagtgaatcagacctggaagaaagcaaagagaagttaaattcgtctagttcatcc
gaaggtagcacagttgatatcggacttcctgcagaagaacaaccagaagctgaacccgaa
gaagcccaggagccagaggcctgcttcacagaaggctgtgtacgaaggttcaagtgctgt
caagtaagtatagaagaagggagaggaaagcagtggtggaaccttagaaaaacctgcttc
aggattgtcgaacacaactggtttgagactttcattgtctttatgattctcctcagtagt
ggagctctggcttttgaagacatatatattgaacagcgtaaaactatcaagaccatgctg
gaatatgctgataaggtcttcacttacatcttcattctggaaatgctgctgaagtgggtg
gcctatggctatcaaacatactttactaatgcctggtgctggctggacttcctgattgtc
gatgtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgccatt
aagtcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggc
atgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctc
gtttgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaag
ttctactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaat
tttagtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaa
gtaaactttgataatgtaggatttgggtatctatctttacttcaagtagctacatttaaa
ggctggatggatattatgtatgcagcaattgactcaagagatgtattacagcaacccaag
tatgaagacaacctgtacatgtatttgtattttgtcatctttataatttttgggtctttt
ttcaccctgaacctgttcattggtgtcattattgataacttcaatcagcaaaaaaagaag
tttggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaa
aagctgggatccaaaaagccacaaaaacctataccaagaccagggaacaaattccaaggc
atggtctttgattttgtgacacagcaagtctttgacattagcatcatgattcttatttgt
cttaacatggttaccatgatggtagaaactgacgaccagagtaaagaaatggaaaatatt
ttatactggataaacctggtgttcattgtccttttcactggagaatgtgtcctgaaatta
atttcacttcgccactactactttactataggatggaacatttttgattttgtagttgtc
attctctcaatagtaggtatgttcttagctgagatgattgagaaatattttgtgtccccc
acactattcagagtgatccgacttgccagaatcggtcgaattctgcgtctcattaaaggc
gctaagggaatccgcactctgctttttgctttgatgatgtctcttcctgctttgttcaac
attggtctgctgctgttcctggtcatgtttatctatgcgatatttggcatgtccaacttt
gcctatgttaagagggaagctgggattgatgacatgttcaactttgaaacgtttggcaac
agcatgatctgcctctttcaaattaccacatctgctggctgggatggtttgctcgcccca
attcttaacagtggggagccagactgtgaccctaacaaagcccatccggggagctctgtg
aaaggcgactgcggcaacccttctgttgggatcttcttctttgtcagctacattatcatc
tcatttctggtagtggtgaacatgtacattgctgtgattttggagaattttggtgttgct
actgaagaaagcgctgaacccttgagcgaggatgactttgagatgttctacgaagtctgg
gagaagtttgatcctgatgcaacacaattcatggaatttgagaaattgtctgattttgca
gcagcactcgagcctcctcttcatctacccaaaccaaacaaagtccagcttattgcaatg
gatctgcccatggtaagcggcgacagaattcactgccttgacatcttgtttgctttcaca
aagcgtgttttgggggaaagtggggagatggacgccctcagaatacagatggaagatcgg
tttatggcatccaatccttcaaaagcttcctatgaaccaattacaaccacattaaaacga
aaacaggaggaggtatctgctgtcattattcaacgggcttacagacgtcaccttttaaaa
cgaacagtaaaacaagcttccttcatctataacaaaaataaaaccgaaggaggcgctggt
ctgggtctgaaagatgaaatccttattgacaagttaaatgaaaactcatttacagagaaa
accgatataactgcatcaacagcagtttgtccaccttcttatgatcacgtaacaaggcca
gtcaaagaaaaacatgaaaaggaagataaaggtggtcagaaataa
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