Rissa tridactyla (black-legged kittiwake): 128912678
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Entry
128912678 CDS
T09443
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtd02000
]
128912678 (SLC6A4)
Transporters [BR:
rtd02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128912678 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
128912678
NCBI-ProteinID:
XP_054065021
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Position
7:52446740..52468452
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AA seq
670 aa
AA seq
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MEKKATSNETEPLTSKKDVSDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGEKGE
AAQISNGYSGVQSSVPCNGMGEVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTAELPWTSC
TNAWNTGNCTNYFSKDNVSWSPHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLIIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFEYNYPYWTTVVGYCIGTSSVICIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaatgagactgagccgctgacttccaagaaagatgtctca
gactgtaacgaaggagaagattgtaaagagaacggacttctggtcaggaaccctaaatct
gccctacggctagtggaagatggcaataaagtccaccccagccagggagaaaaaggggag
gcagctcagatctcaaatggttattcaggggttcagagctctgttccctgcaatggaatg
ggagaggtggaagatgcccagtgcactgccccagcagccacaaccaccactacaaccacg
acttccaccacctgcggagcagaaggccagcagcagctgatggagctggaagacagagag
acctggagtaaaaaaattgactttctactctctgtcatcggatatgcagtggatctggga
aatgtgtggagatttccttatatatgctatcaaaacggaggaggagcgttcctcatccct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccaccggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctactataacaccattatg
gcttgggccttttactacctcgtatcctccttcacggcggagctgccatggaccagctgc
acaaatgcttggaatacaggcaactgcaccaactacttcagcaaggacaacgtcagctgg
tccccgcactccatctctcccgcagaagaattttatacccgccaagttctacaggtgcac
aggtccaatgggctggacgacctggggggcattagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtctgggtgactgccacattcccttacatcatactcttcatcctgctggtgagaggtgca
actctgcctggcgcctggagaggtgtcctctactacttgaaacctgactggcagaaactc
ctggccaccgaggtttgggtggatgcagcagctcagatctttttctcccttggtccaggt
tttggggtcctattggcttatgccagctacaacaaattccacaacaactgctaccaagat
gctctggttaccagtaccgtgaactgcgtcactagtttcgtgtctggattcgtcattttc
actgtgctgggatacatggctgagatgaggaatgaagatgtatcagaggttgccaaagat
accggacccagccttctcttcatcacgtacgccgaggccattgcaaacatgcctgcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgattactggagtactggatgaattcccccatgtctggagcaaa
cgcagggaattgtttgtccttggtctgatcatcgtttgctttctggggtcattagcaacc
ctgacatttggaggcgcatatgtggtaaagctgtttgaagaatacgccactggtccagct
gtcctaaccgtcgtcttcctggaagcagttgctgtggcctggttctacggcatcacccag
ttttgcaatgatgtgaaagaaatgcttggctttaccccaggctggtactggcgagtttgc
tgggtggcaattagtcccatcttccttctgttcgtcacttgcagctttctgtccaaccct
cctgagctacggctttttgaatataattatccctactggaccacggtagtgggttattgc
ataggaacctcttctgtcatctgtattccaatctacatggtttatcggttgattatcact
ccaggaacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaacgcggtataa
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