Rissa tridactyla (black-legged kittiwake): 128913540
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Entry
128913540 CDS
T09443
Symbol
ATP6V0B
Name
(RefSeq) V-type proton ATPase 21 kDa proteolipid subunit c'' isoform X1
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00052
Galactose metabolism
rtd00510
N-Glycan biosynthesis
rtd00513
Various types of N-glycan biosynthesis
rtd00514
Other types of O-glycan biosynthesis
rtd00515
Mannose type O-glycan biosynthesis
rtd00533
Glycosaminoglycan biosynthesis - keratan sulfate
rtd00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtd01100
Metabolic pathways
Module
rtd_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
rtd_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
128913540 (ATP6V0B)
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
128913540 (ATP6V0B)
00513 Various types of N-glycan biosynthesis
128913540 (ATP6V0B)
00515 Mannose type O-glycan biosynthesis
128913540 (ATP6V0B)
00514 Other types of O-glycan biosynthesis
128913540 (ATP6V0B)
00533 Glycosaminoglycan biosynthesis - keratan sulfate
128913540 (ATP6V0B)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
128913540 (ATP6V0B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtd01003
]
128913540 (ATP6V0B)
Enzymes [BR:
rtd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
128913540 (ATP6V0B)
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
128913540 (ATP6V0B)
2.4.1.90 N-acetyllactosamine synthase
128913540 (ATP6V0B)
Glycosyltransferases [BR:
rtd01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
128913540 (ATP6V0B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
ATP-synt_C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
128913540
NCBI-ProteinID:
XP_054067270
LinkDB
All DBs
Position
8:43866352..43882643
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AA seq
530 aa
AA seq
DB search
MTGLALLYSGLGLAFWSTLLGVGICYTIFDLGFRFDVAWFLTETSPFMWCNLGIGLAISL
SVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSA
VTPEAIGARNYHAGSGPWLEPPPCPTERTCPPARAQKMTRLLLGVTLERICKAVLLLCLL
HFVIIMILYFDVYAQHLDFFSRFNARNASRAHPFSNFSRPNGTIPSYAPAGAEAPSPSAK
PSTNQSATEKPLQPCQEMPPGLVGRLLIEFSSPMSMERVQRENPDVRQGGKYTPPDCLPR
QKVAILIPFRHREHHLKYWLHYLHPILRRQKVAYGIYIINQFGEDTFNRAKLLNVGFLEA
LKDDEEYDCFIFSDVDLIPMDDRNLYRCYEQPRHFAVGMDKFGFRLPYAGYFGGVSGLSK
SQFLKINGFPNEYWGWGGEDDDIFNRISLNGMKVSRPDIRIGRYRMIKHERDKHNEPNPQ
RFTKIQNTKMTMKRDGISSLQYRLVEVSRQPMYTNITVEIGRPPPRLARG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacggggctcgccctgctgtactcggggctcggcctcgccttctggagcacgctgctg
ggcgtcgggatctgctacacaatatttgacctgggcttccgcttcgatgtggcctggttc
ctgacagagacctcacccttcatgtggtgcaacctgggcattggcctggccatttccctg
tctgtggtgggagctgcttgggggatttacatcacgggctccagcatcatcggtggtgga
gtcaaagcccctcggatcaaaaccaagaacctggtcagcatcattttctgcgaggctgtg
gccatctacgggatcatcatggcaattgtcatcagtaacatggctgagcctttctctgca
gtcaccccagaggcgattggagccaggaactaccacgcaggatcaggaccgtggctggag
ccgcccccctgccccactgagcgcacatgtccgcctgcccgtgcccagaagatgaccagg
ctgctcttgggggtgaccctggaaaggatttgcaaggccgtgctgctgctctgcctgctc
cactttgtcatcatcatgatcctctacttcgacgtctacgcgcagcacctggacttcttc
agccgcttcaacgccaggaacgcctcgcgcgcccaccctttctccaacttctcccgcccc
aacggcaccatccccagctacgcgccagctggcgctgaggccccgtcccccagcgccaag
cccagcaccaaccagtctgccactgagaagcccttgcagccctgccaggagatgcctccc
ggcttagttgggcgcctgctcatcgagttcagctctcccatgagcatggagcgggtgcag
cgggagaaccccgatgtgcgccagggtggcaagtacacccccccagactgcctgccccgg
cagaaggtggccatcctcatccccttccgacaccgtgaacaccatctcaagtactggctg
cactacctgcaccccatcctgcgccggcagaaggtggcttacggcatctacatcatcaac
cagtttggcgaggacaccttcaaccgggccaagctgctcaatgtggggttcctggaggcc
ctcaaggatgacgaggagtatgactgcttcatcttcagcgacgtggacctcatccccatg
gacgaccgcaacctctatcgctgctatgagcagccacggcactttgccgttggcatggac
aagtttgggttcaggctgccctatgctggctacttcggtggcgtctctgggctgagcaag
tcacagttcctgaagatcaacggctttcccaacgagtactggggctggggaggagaggac
gatgacatctttaaccgcatctccctgaacggcatgaaggtgtcgaggcccgacatccgc
atcgggaggtaccgcatgatcaagcacgaacgtgacaaacacaacgagcccaacccgcag
agattcaccaagatccagaacaccaaaatgacgatgaagcgggatgggatcagctcgctg
cagtaccggctggtggaggtttcacgccagcccatgtacaccaacatcacggtggagatc
ggcaggccgcccccccgcctggcccggggctag
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