Rissa tridactyla (black-legged kittiwake): 128915484
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Entry
128915484 CDS
T09443
Symbol
SETDB2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00310
Lysine degradation
rtd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128915484 (SETDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128915484 (SETDB2)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
128915484 (SETDB2)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128915484 (SETDB2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128915484 (SETDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
128915484
NCBI-ProteinID:
XP_054071817
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All DBs
Position
1:complement(33089951..33114237)
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AA seq
733 aa
AA seq
DB search
MQPPQKMEGKKMLCDCFEVENLTSSREEKTEGDLKMFWTQLGGRRVDVIFEQVQNVLLLL
KQKIKNGTATNQECWQAWMLVNEANLGDLLSLTNGSDVFDRDGVRETKPKLQRLTDDSTA
DSIEGSHRKKEEMEKTGSGSKEASGKIQDLPLNLQYKNHKCSSACLANRSAGSFKGENPL
KIPILFHFQRRHAKADCLSKSLDVNYKAPCGRSLRSFQDVQNYLFETECNFLFVDHFSFN
TYVLLGRNTVNPEPLVFDFDISNGAESVPVSFCNDLDRARLPYFKYRRASWPRAYYLNNF
SSMFVDSCDCTDGCIDRSKCACLQLTARGCSKISLSPRSKTCHGYSYKRLEGPVPSGIYE
CSVLCRCDKMMCQNRVVQHGIQVRLQVFNTEKKGWGVRCLDDIDKGTFVCTYSGRLMSRA
EVQVLGDAGQGLKEKSAVNDRGNGFFSKKRKLDTDCSDSVIELVQTDKTDILEKQQSLSQ
TVDNENKLTPVRAKNSSIATARRPGTRIAVFHNDQLKMEIDTLVRTASSDEDNSSQIHQS
SKTKLTSGTKKGKEKSTHQQKEEHPMEIRRTEPADVDSAECKKKSLSLQGVDCGKSGVPR
DTCVVGPSKNIALKADCKEENHRQSKQDAFCEEADGDRMLLKNADEENIYVLDATKEGNV
GRFLNHSCCPNLFAQSVFVETHNRSFPWVAFFTNRHVKAGTELTWDYGYEAGSMPETEIS
CQCGVPKCRKKTL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccccagaagatggaagggaaaaaaatgctgtgcgactgctttgaagtggag
aaccttaccagttccagggaggagaagactgaaggtgacttgaagatgttttggacacag
ttgggaggtagaagagtggatgtcatatttgagcaagtgcaaaatgtgctgctgttgctg
aagcaaaagatcaagaacggaactgccacaaaccaagaatgctggcaggcttggatgctg
gtgaatgaagctaatttaggtgatctcttatctttgacaaatggaagtgatgtgtttgat
agagatggtgtacgggaaaccaaacccaaattgcaacgtcttacagatgacagcactgca
gactccatagaaggttctcacagaaaaaaagaggagatggaaaaaacaggttcagggagt
aaagaagcatctggtaaaattcaagatttacccttaaacctgcagtataagaaccacaag
tgctctagtgcttgtcttgccaacagatcagcgggctccttcaagggtgaaaatcctctt
aagataccaatcctgtttcactttcaaaggcgccatgcaaaagcggactgcctttcgaaa
tcactggatgtgaattataaagctccttgcggtcgaagtctgagaagctttcaagatgtg
caaaattatttgtttgaaacggagtgcaacttcttatttgttgatcacttctccttcaac
acatatgtactgttgggcaggaacactgtaaatcccgaaccccttgtgttcgattttgat
attagcaatggagccgagtctgtgcctgtttctttctgtaacgatcttgaccgcgcaaga
ttaccttatttcaaatatcggagggcatcgtggccacgtgcttattatctcaacaatttc
tccagcatgtttgttgattcatgtgactgcacagatggctgcattgataggtcaaaatgt
gcatgcctacagctaactgcaagaggctgtagtaaaatttctctgtctccacgtagtaaa
acatgccatggatacagttacaaaagactggagggacctgttcctagtggaatttatgag
tgtagtgtgttgtgcaggtgtgacaagatgatgtgtcagaatagagttgtacagcatggc
attcaagtcaggttgcaagtgttcaacacagaaaagaaaggctggggtgtccgctgccta
gacgatatcgacaaggggacatttgtttgcacttactcaggcagattaatgagcagagct
gaagttcaagtattgggggatgctggtcaagggctgaaagagaagagtgctgtgaatgac
agaggcaatggctttttttccaaaaaaagaaaacttgacactgattgttcagactccgta
attgaactagtacagactgacaaaactgacattcttgagaagcagcagtctttgtctcag
actgtggataatgaaaataaattaaccccagttcgtgcaaagaattcaagtattgcaacc
gcgaggagacctggaactagaatagctgtttttcataatgaccagctaaaaatggaaatt
gatacactggtgcgcactgccagctcagatgaagataatagttctcagattcatcagtca
agcaaaacaaaactaaccagtggaacaaagaaaggaaaagaaaaatccactcatcagcag
aaggaagagcatccgatggaaattagacggactgagcctgctgacgtggacagtgcagaa
tgcaaaaaaaagagtctgtctctgcagggtgttgattgtggcaagtcaggtgtgccgcgt
gacacgtgtgttgtggggccatccaaaaacatagccctaaaagctgactgcaaagaggag
aatcacaggcagtcaaaacaagatgcattttgtgaggaggctgatggtgacaggatgctt
ctgaagaatgctgatgaagaaaatatttatgtactagatgccacaaaagaaggaaatgtg
ggtcgttttcttaaccacagctgctgcccaaatctctttgcacaaagcgtgtttgtagag
actcacaacagaagtttcccatgggtggcattcttcacaaacaggcatgtgaaagctgga
actgaactcacatgggattatggttatgaagctggaagcatgccagagacagagatttcc
tgtcagtgtggagttccgaagtgcaggaaaaaaaccttatag
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